cluster # 7300

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Schistosoma mansoni
cluster # 7300 cluster # 7300 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7300#0 length = 402 sequences # 5

consensusID : consensus_7300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 402
fasta sequence

                              [GCTTTAAC-AATCAAGCTACCACTAACGTGATGATTCTTCA-GGAATCCTAGTATAAGTGACTAGGATC-AATTT-AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC-AATTCATTTTAGGACAACGTGAATAATG-ATTAG-AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA]

[+] EMBL CD120043             [GCTTTAAC AATCCAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTTTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAG ]
[+] EMBL CD120008             [GCTTTAACAAATCAAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATCAAATTTAAAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATCAAATTAATTTTAGGACAACGTGAAAAATGAATTAGAAAACTAGAACAAGCTATTTTGGTGAAATTca                                                                                                                                                                                                                              ]
[-] EMBL CD120368             [ CTTNAAC AATCAAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTTTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA]
[-] EMBL CD120081             [  cTTAAC AATCAAGCTACCACTAACGTGATGATTC TCAGGGGATCNTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCCAATGAATGAAGAGAATATGATAATC AA TCATTTTAGGGCAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA]
[-] EMBL CD120469             [                                GATCTTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTNTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA]




>consensus_7300#0
GCTTTAACAATCAAGCTACCACTAACGTGATGATTCTTCAGGAATCCTAGTATAAGTGAC
TAGGATCAATTTAAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATCAATT
CATTTTAGGACAACGTGAATAATGATTAGAAACTAGAACAAGCTATTTTGGTGAATTTAA
TAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAG
TTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGAT
AAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAG
GAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA

clustalw multiple alignements is not computed in this case