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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7304 cluster # 7304       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7304#0 length = 871 sequences # 5  

consensusID : consensus_7304#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 871
fasta sequence
                              [CGTATTTAGGTAGTGACGAACTTGCCTCCCTCATTGCAACTGCTGCTCAAGATTCTGTTGGGGCTGAGCTAAGTGAGGAAGACTGTGAAAACCTTCAAAAATATGCACAACGCTTATTGCAAATGAATGAGGCAAAACAACGGTATGTAAATTCCTTGTCACGACGAATAACTAGTTTGTGTCCTAATTTGCATGCTCTTCTTCACTGTACACTTCATTCAAGTGATGAGGCGGAACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGCTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAANATATTAAGAGATCCGAAATTACCAACAGATACAGACAATCTTCAACCGGCAACTCCCAGTATTTCCGCAGCTGAGTTGAAGTCTTTGAGTGCTAATCGTGTACAGAGGAACACAGTGCATCGTCGTGCTGCGCGTCTACTTGCTGATAAATCAGTTCTCGCTTGTCGTGCAGACTGTTTCCGCCAACACAATCCCATTTACCAACA--GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAA-AACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGTAAAGCTTGGTTCACCCGTAAACTTTC]

[+] EMBL CD153045             [CGTATTTAGGTAGTGACGAACTTGCCTCCCTCATTGCAACTGCTGCTCAAGATTCTGTTGGGGCTGAGCTAAGTGAGGAAGACTGTGAAAACCTTCAAAAATATGCACAACGCTTATTGCAAATGAATGAGGCAAAACAACGGTATGTAAATTCCTTGTCACGACGAATAACTAGTTTGTGTCCTAATTTGCATGCTCTTCTTCACTGTACACTTCATTCAAGTGATGAGGCGGAACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGCTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAANATATTAAGAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD194576             [                                                                                                                                                                                                                                          AACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGTTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAAAATATTAAGAGATCCGAAATTACCAACAGATACAGACAATCTTCAACCGGCAACTCCCAGTATTTCCGCAGCTGAGTTGAAGTCTTTGAGTGCTAATCGTGTACAGAGGAACACAGTGCATCGTCGT                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD152487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTGAGTGCTAATCGTGTACATAGGAACACAGCGCATCGTCGTGCTGCGCGTCTACTTGCTGATAAATCAGTTCTCGCTTGTCGTGCAGACTGTTTCCGCCAACACAATCCCATTTACCAACA  GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGG                                                                                                                                                                         ]
[-] EMBL CD061249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCAACACAATCCCATTGACCAACAAGGCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAATAACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGTAAAGCTTGGTTCACCCGTAAACTTTC]
[-] EMBL CD061267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCAACACAATCCCATTTACCAACA  GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAA AACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGAAAAGCTTGGTTCACCCGTAA      ]


>consensus_7304#0 CGTATTTAGGTAGTGACGAACTTGCCTCCCTCATTGCAACTGCTGCTCAAGATTCTGTTG GGGCTGAGCTAAGTGAGGAAGACTGTGAAAACCTTCAAAAATATGCACAACGCTTATTGC AAATGAATGAGGCAAAACAACGGTATGTAAATTCCTTGTCACGACGAATAACTAGTTTGT GTCCTAATTTGCATGCTCTTCTTCACTGTACACTTCATTCAAGTGATGAGGCGGAACAAG GAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAG CTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAG GAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGCTGTGGCTACATCTACAGGTCTTT TATCAAACGCAACTAANATATTAAGAGATCCGAAATTACCAACAGATACAGACAATCTTC AACCGGCAACTCCCAGTATTTCCGCAGCTGAGTTGAAGTCTTTGAGTGCTAATCGTGTAC AGAGGAACACAGTGCATCGTCGTGCTGCGCGTCTACTTGCTGATAAATCAGTTCTCGCTT GTCGTGCAGACTGTTTCCGCCAACACAATCCCATTTACCAACAGCAAGGTCTTGCTTCAC AACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATC TTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAG ACAAAACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTA AACGTAAAGCTTGGTTCACCCGTAAACTTTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)