Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7313 cluster # 7313       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7313#0 length = 709 sequences # 5  
consensusID : consensus_7313#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 709
fasta sequence 
                              [TGTAAGTATTCGGAATTTACAACATTATTAGATTAAAACAGATGATAAACAATATTATGATGTCGTTAGAAGAATTTTTATCAAATCACTAGAATTCATAATCGATAATATTCTATCTTGTTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTGGTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAATTCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAGAAGACGAAGATAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAGTATTCAATTCAGAGTATACCAGTTAGACAGAATACTTCATCTACGAATGTAGAATATTGTATCAGTATGCTTTCAACCAACAAACAAAGTTTATGTCTTTTTCAATTCTCTTCTGATATTCCAATGAATATGGAAAATAGTTCATTAACATATGTAAATAATAAACAAATCAATTATCCATTACCTTACATAACTAGATCATTTACTCAACTTAAACCAGTATTCATTATAAAATGTTACAAAAATAATTGTTCAAAACAATTAGATTCATCATTTTTAAATGGAATGTACTTTTGTATACATTTCATTCATCTATATGGCCATTAATTCTACTATATACATTAACAAC]

[-] EMBL CD189061             [TGTAAGTATTCGGAATTTACACCATTATTAGATTAAACCGGATGATAACCAATATTATGATGTCGTTAGAAGAATTTTTATCAAATCACTAGAATTCATAATCGATAATATTCTATCTTGTTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTGGTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAATTCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAAAAGACGAAGATAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAGTATTCAATT                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD188775             [TGTAAGTATTCGGAATTTACAACATTATTAGATTAAAACAGATGATAAACAATATTATGATGTCGTTAGAAGAATTTTTATCAAATCACTAGAATTCATAATCGATAATATTCTATCTTGTTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTGGTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAATTCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAGAAGACGAAGATAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAGTATTCAAT                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD189204             [TGTAAGTATTCGGAATTTACAACATTATTAGATTAAAACAGATGATAAACAATATTATGATGTCGTT   AGAATTTTTATCAAATCACTAGAATTCATAATCGATAATATTCTATCTTGTTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTGGTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAATTCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAGAAGACGAAGATAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAGTATTCAATT                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD183477             [    AGTATTCGGAATTTACAACATTATTAGATTAAAACAGATGATAAACAATATTATGCTGTCGTTAGAAGAATTTTTATCAAATCACTAGAATTCATAATCGGTAATATTCTATCTTGTTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTGGTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAATTCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAGAAGACGAAGATAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAGTATTCAAT                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD196740             [                                                                                                                                                                                                                                                                   CTGAATTATCAGAATTCACAGAGAAGACGAAGACAAACGAATCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTCGACAATCCATTACAAGTTCAGTATTCAATTCAGAGTATACCAGTTAGACAGAATACTTCATCTACGAATGTAGAATATTGTATCAGTATGCTTTCAACCAACAAACAAAGTTTATGTCTTTTTCAATTCTCTTCTGATATTCCAATGAATATGGAAAATAGTTCATTAACATATGTAAATAATAAACAAATCAATTATCCATTACCTTACATAACTAGATCATTTACTCAACTTAAACCAGTATTCATTATAAAATGTTACAAAAATAATTGTTCAAAACAATTAGATTCATCATTTTTAAATGGAATGTACTTTTGTATACATTTCATTCATCTATATGGCCATTAATTCTACTATATACATTAACAAC]




>consensus_7313#0
TGTAAGTATTCGGAATTTACAACATTATTAGATTAAAACAGATGATAAACAATATTATGA
TGTCGTTAGAAGAATTTTTATCAAATCACTAGAATTCATAATCGATAATATTCTATCTTG
TTATTCTTTAAATTTGCCATCTTCATGGAAATGGTATTATCTACAAAACATAATCCATTG
GTAATAAGTTACTCAGTATTATATTGTACTCTATTATTGACATGTATCGTGCTTACAAAT
TCACAAACAGTATTCATTCCTGAATTATCAGAATTCACAGAGAAGACGAAGATAAACGAA
TCTACTATGAAAGGACTGCTAGTCGACTTATTAAGTGTTGACAATCCATTACAAGTTCAG
TATTCAATTCAGAGTATACCAGTTAGACAGAATACTTCATCTACGAATGTAGAATATTGT
ATCAGTATGCTTTCAACCAACAAACAAAGTTTATGTCTTTTTCAATTCTCTTCTGATATT
CCAATGAATATGGAAAATAGTTCATTAACATATGTAAATAATAAACAAATCAATTATCCA
TTACCTTACATAACTAGATCATTTACTCAACTTAAACCAGTATTCATTATAAAATGTTAC
AAAAATAATTGTTCAAAACAATTAGATTCATCATTTTTAAATGGAATGTACTTTTGTATA
CATTTCATTCATCTATATGGCCATTAATTCTACTATATACATTAACAAC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)