Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7329 cluster # 7329       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7329#0 length = 610 sequences # 5  

consensusID : consensus_7329#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 610
fasta sequence
                              [GGTTTCTGTTTTACATCAATGTATAAGGAATAGCAGATTTATATAAACTCATACGAACATTATATAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTATACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATATAAAAGATTATGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTATACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAATGTATCAATCACAAAATATAGAAAAACAGTACTTCCATATGTCCAATTTGTATACATTCAAGATATTTGTGTAATTTTAAATCAGTCATTCCAAAAATGAAGAGTCAGTTCGAATCGTACCGGGAATTGAAGCATAAATATATATATGTATAAAAGTTTATAAAAAACAGATGTTAACACTTTCACTTTATCCACAAAAGTTCGGTCAAGATTATATATATGTTGCCTATAGTAGTAGTAACAACTTAAGTAATATACAAATCAAATATGCAAATTAACAATCGTCAGCTTTCTTTTTTTTTGAAGTTAG]

[+] EMBL CD076552             [GGTTTCTGTTTTACATCAATGTATAAGGAATAGCAGATTTATATAAACTCATACGAACATTATATAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTATACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATATAAAAGATTATGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTATACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAATGTATCAATCACAAAATATAGAAAAACAGTACTTCCATATGTCCAATTTGTATACATTCAAGATATTTGTGTAATTTTAAATCAGTCATTCCAAAAATGAAGAGTCAGTTCGAATCGTACCGGGAATTGAAGCATAAATATATATATGTATAAAAGTTTATAAAAAACAGATGTTAACACTTTCACTTT                                                                                                                         ]
[-] EMBL BF440136             [       ngTTNACANCAATGTATAAGGAATAGCAGATTTATATAAACTCATACGAACATTATATAATTAAACGTGATTTACACTAACTGACCCAATAGCTGGCAAAATTGGAAAACTATACTNGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAANCCTCATAAGAGAATATAAAAGATTATGGAAGTGGTGTGTATCA                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BF936837             [                                                     CGAACATTATATAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTATACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATATAAAAGATTTTGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTATACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAATGTATCAATCACAAAATATAGAAAAACAGTACTTCCATATGTCCAATTTGTATACATTCAAGATATTTGTGTAATTTTAAATCAGTCATTCCAAAAATGAAGAGTCAGTTCGAATCGTACCGGGAATTGAAGCATAAATATATATATGTATAAAAGTTTATAAAAAACAGATGTTAACACTTTCACTTTATCCACAAAAGTTCGGTCAAGATTATATATATGTTGCCTATAGTAGTAGTAACAACTTAAGTAATATACAAATCAAATATGCAAATTAACAATCGTCAGCTTTCTTTTTTTTTGAAGTTAG]
[+] EMBL AI975523             [                                                     CGAACATTATATAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTATACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATATAAAAGATTATGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTATACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAATGTATCAATCACAAAATATAGAAAAACAGTACTTCCATATGTCCAATTTGTATACATTCAAGATATTTGTGTAATTTTAAATCAGTCATTCCAAAAATGAAGAGTCAGTTCGAATCGTACCGGGAATTGAAGCATAAAT                                                                                                                                                                           ]
[+] EMBL AI976050             [                                                     ccAACATTATTTAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTATACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATATAAAAGATTATGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTATACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAATGTATCAATCACAAAATATAGAAAAACAGTNCTTCCATATGTCCAATTTGTATACATTC                                                                                                                                                                                                                                                           ]


>consensus_7329#0 GGTTTCTGTTTTACATCAATGTATAAGGAATAGCAGATTTATATAAACTCATACGAACAT TATATAATTAAACGTGATTTACACAAACTGATCCAATAGCTGGCAAAATTGGAAAACTAT ACTTGCAGAATAGATCATCAATATCATTGTTTACGAGTGCAAATCCTCATAAGAGAATAT AAAAGATTATGGAAGTGGTGTGTATCACGAATTTACGGAAGCACAATAGGTGAGTGTTAT ACAAATAAAAAATAACCAGTGGACAGTCAATAAACATCATAAGCATCATACTTCCATCAA TGTATCAATCACAAAATATAGAAAAACAGTACTTCCATATGTCCAATTTGTATACATTCA AGATATTTGTGTAATTTTAAATCAGTCATTCCAAAAATGAAGAGTCAGTTCGAATCGTAC CGGGAATTGAAGCATAAATATATATATGTATAAAAGTTTATAAAAAACAGATGTTAACAC TTTCACTTTATCCACAAAAGTTCGGTCAAGATTATATATATGTTGCCTATAGTAGTAGTA ACAACTTAAGTAATATACAAATCAAATATGCAAATTAACAATCGTCAGCTTTCTTTTTTT TTGAAGTTAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)