These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7330#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 611 fasta sequence [ATAATGGACATATTCCAGATGGGAAAGTCACTCTGCTGCTGGGGAAATTATGGTCAAGAGAGTGGGGTTCTGACTAGTTTCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAGAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAACAGACTGGATACCGTAAGGATTAGTCGTGCACAGACCAAGTCACGCCACTACGGATCATCGTTGAACAATCTGTTGAGTGTAACTCGTCGCTATACATCAACTGCATTGACTATGAGGTGTTTGGTAGTGTGGGCAGGAGAATATTATGGAAACTATGGACACTATGGTGTTCCTGAGAATGTCAACATTTTCCGGAACTAATACGATGGACTACAGTGCAAAGTGGTGGACAGCTGACCGACGTTGGAAGTGGATAAGACATACATTGAGGAAATCACCANACTGCATCACGAGGGCAGGCCTAAATTGNAACCCTNGAGACAAAGAAGTAATGAAAATCGGAAGGCCAGAGACACACTGCGTTGT] [-] EMBL CD144840 [ATAATGGACATATTCCAGATGGGAAAGTCACTCTGCTGCTGGGGAAATTATGGTCAAGAGAGTGGGGTTCTGACTAGTTTCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAGAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAACAGACTGGATACCGTAAGGATTAGTCGTGCACAGACCAAGTCACGCCACTACGGATCATCGTTGAACAATCTGTTGAGTGTAACTCGTCGCTATACATCAACTGCATTGACTATGAGGTGTTTGGTAGTGTGGGCAGGAGAATATTATGGAAACTATGGACACTATGGTGTTCCTGAGAATGTCAACATTTTCCGGA ] [+] EMBL CD183421 [ GGTCAAGAGAGTGGGGTTCTGACTAGTTCCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAAAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAACAGACTGGATACCGTAAGGATTAGTCGTGCACAGACCAAGTCACGCCACTACGGATCATCGTTGAACAATCTGTTGAGTGTAACTCGTCGCTATACATCAACTGCATTGACTATGAAGTGTTTGGTAGTGTGGGCAGGAGAATATTATGGAAACTATGGACACTATGGTGTTCCTGAGAATGTCAACATTTTCCGGAACTAATACGATGGACTACAGTGCAAAGTGGTGGACAGCTGACCGACGTTGGAAGTGGATAAGACATACATTGAGGAAATCACCANACTGCATCACGAGGGCAGGCCTAAATTGNAACCCTNGAGACAAAGAAGTAATGAAAATCGGAAGGCCAGAGACACACTGCGTTGT] [+] EMBL CD188756 [ GGTCAAGAGAGTGGGGTTCTGACTAGTTTCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAGAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAACAGACTGGATACCGTAAGGATTAGTCGTGCACAGACCAAGTCACGCCACTACGGATCATCGTTGAACAATCTGTTGAGTGTAACTCGTCGCTATACATCAACTGCATTGACTATGAAGTGTTTG ] [+] EMBL CD189550 [ GGTCAAGAGAGTGGGGTTCTGACTAGTTTCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAGAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAAC ] [-] EMBL CD183573 [ GTCAAGAGAGTGGGGTTCTGACTAGTCTCGTAAGACGATAACCACCTGTTGCATGCAAAGGTTGGCACAAATACTTCTTATTTATCCCTCAGAAAGTAATTTACAGCTGTTTTGACTCGATATGACACTTCTTGACAGCGTGCATTTACGAACCGGGTGACAGACCCAGTAGACGCCCAACATCGTGATCAACAGACTGGATACCGTAAGGATTAGTCGTGCACAGACCAAGTCACGCCACTACGGATCATCGTTGAACAATCTGTTGAGTGTAACTCGTCGCTATACATCAACTGCATTGACTATGAGGTGTTTGG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||