Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7339 cluster # 7339       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7339#0 length = 813 sequences # 5  
consensusID : consensus_7339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 813
fasta sequence 
                              [TGGGCGGTCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTGGAATTTCCGGCAACTTGCTTGTACTCGGAATTGCTTTGGTTTACCACTCGTCGACCGGACCAATCAGCTACAGCATTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTACTTTTGAATTTTCTAAATTACCTTGAACGCGTTATTTTTAATGCAACTAATGGTTTTGCAATTACACTTTCTCATCCATCAACATCTGCTTCTATATTTTTCACCGCAAATGAAAACACTTGTACACAGTGGTTTAATCGTATTCGAACTCTTCTCGTTCGTATCTCAAGTGACTTGCCGTTAGTGT]

[+] EMBL CD130752             [TGGGCGGTCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTGGAATTTCCGGCAACTTGCTTGTACTCGGAATTGCTTTGGTTTACCACTCGTCGACCGGACCAATCAGCTACAGCATTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTC                                                                                                                                                                                                                                   ]
[+] EMBL CD064122             [                                                                                                                       TTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCAACAAAAGAAGAAa                                                                                                                                                                                                                   ]
[-] EMBL CD159017             [                                                                                                                                                                                                                                                                                                                                                                                     CACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTACTTTTGAATTTTCTAAATTACCTTGAACGCGTTATTTTTAATGCAACTAATGGTTTTGCAATTACACTTTCTCATCCATCAACATCTGCTTCTATATTTTTCACCGCAAATGAAAACACTTGTACACAGTGGTTTAATCGTATTCGAACTCTTCTCGTTCGTATCTCAAGTGACTTGCCGTTAGTGT]
[-] EMBL CD158587             [                                                                                                                                                                                                                                                                                                                                                                                                        GTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAG                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD166845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTAC TTTGAATTTTCTA                                                                                                                                                                            ]




>consensus_7339#0
TGGGCGGTCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTGGAATTTCCGGCAACTT
GCTTGTACTCGGAATTGCTTTGGTTTACCACTCGTCGACCGGACCAATCAGCTACAGCAT
TATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGA
CTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAG
CTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATT
GGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTT
CATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGG
TTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTG
AAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATC
AGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGA
ACCGACATTTAAACCAGATCCACTTACTTTTGAATTTTCTAAATTACCTTGAACGCGTTA
TTTTTAATGCAACTAATGGTTTTGCAATTACACTTTCTCATCCATCAACATCTGCTTCTA
TATTTTTCACCGCAAATGAAAACACTTGTACACAGTGGTTTAATCGTATTCGAACTCTTC
TCGTTCGTATCTCAAGTGACTTGCCGTTAGTGT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)