These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_734#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 310 fasta sequence [CGAAATAATAATAATAATAATAATAGAAGTGAAGAAAAAGGCCTCNNTGTGCAACAACAACAACAACAGTGGGTAACTAACAATAACCGGCATTTGTTAGAGAAGCATATAAAAAAAACAGAATACACAGTCTCGATGACAACTGAAAACATGAGAGAAGGAATAAAAACTGGGAAAAAATGTCACCTTACGTATATATATATATGGATATATACGGAAATCACATGGCAGTCAGTTAATTTTTGAGACAAATATGGATATATATATATATATATATGCTGAATTGTTTCATCTTGTTTATGGTTAACCG] [+] EMBL CD202633 [CGAAATAATAATAATAATAATAATAGAAGTGAAGAAAAAGGCCTCNNTGTGCAACAACAACAACAACAGTGGGTAACTAACAATAACCGGCATTTGTTAGAGAAGCATATAAAAAAAACAGAATACACAGTCTCGATGACAACTGAAAACATGAGAGAAGGAATAAAAACTGGGAAAAAATGTCACCTTACGTATATATATATATGGATATATACGGAAATCACATGGCAGTCAGTTAATTTTTGAGACAAATATGGATATATATATATATATATATGCTGAATTGTTTCATCTTGTTTATGGTTAACCG] consensusID : consensus_734#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 300 fasta sequence [AAAATAAAAATAAAGACAATTCCAAAATACCACCAGTAATTTGAAAAGAGAGTAAAAGAAAACCAAAAAAGAAGTAGAATCTCAGGTAACTACTAGTACTCACTTCTGAAATAGATTGTTACGTCATAGGCAAGTAATAAAGTCGAAATAATAATAATAATAATAGAAGTGAAGAAAAAGGCATCAATGTGCAACAACAACAACAACAGTGGGTAACTAACAATAACCGGCATTTGTTAGAGAAGCATATAAAAAAACCAAATTCCCCGGCTTCAAGAACACTGGAAACCTGAAAAAAGG] [+] EMBL CD185236 [AAAATAAAAATAAAGACAATTCCAAAATACCACCAGTAATTTGAAAAGAGAGTAAAAGAAAACCAAAAAAGAAGTAGAATCTCAGGTAACTACTAGTACTCACTTCTGAAATAGATTGTTACGTCATAGGCAAGTAATAAAGTCGAAATAATAATAATAATAATAGAAGTGAAGAAAAAGGCATCAATGTGCAACAACAACAACAACAGTGGGTAACTAACAATAACCGGCATTTGTTAGAGAAGCATATAAAAAAACCAAATTCCCCGGCTTCAAGAACACTGGAAACCTGAAAAAAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_734#0 CGAAATAATAATAATAATAATAATAGAAGTGAAGAAAAAGGCCTCNNTGTGCAACAACAA 60 consensus_734#1 -AAAATAAAAATAAAGACAATTCCAAAA--TACCACCAGTAATTTGAAAAGAGAGTAAAA 57 ****** ***** * *** * ** * * * * * * * ** consensus_734#0 CAACAACAGTGGGTAACTAACAATAACCGGCATTTGTTAG-AGAAGCATATAAAAAAAAC 119 consensus_734#1 GAAAACCAAAAAAGAAGTAG-AATCTCAGGTAACTACTAGTACTCACTTCTGAAATAGAT 116 ** * ** ** ** *** * ** * * *** * * * * *** * * consensus_734#0 AG--AATACACAGTCTCG-ATGACAACTGAAAACATGAGAGAAGGAATAAAAACTGGGAA 176 consensus_734#1 TGTTACGTCATAGGCAAGTAATAAAGTCGAAATAATAATAATAATAATAGAAGT--GAAG 174 * * ** ** * * * * * **** ** * * * **** ** * * consensus_734#0 AAAATGTCACCTTACGTATATATATATATGGATATATACGGAAATCACATGGCAGTCAGT 236 consensus_734#1 AAAAAGGCATCA---ATGTGCAACAACAACAACAACAGTGGGTAACTAACAATAACCGGC 231 **** * ** * * * * * * * * ** * * * * * * consensus_734#0 TAATTTTTGAGACAAATATGGATATAT-ATATATATATATATGCTGAATTGTTTCATCTT 295 consensus_734#1 ATTTGTTAGAGAAGCATATAAAAAAACCAAATTCCCCGGCTTCAAGAACACTGGAAACCT 291 * ** **** **** * * * * ** * *** * * * * consensus_734#0 GTTTATGGTTAACCG 310 consensus_734#1 GAAAAAAGG------ 300 * * * |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||