Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7341 cluster # 7341       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7341#0 length = 1102 sequences # 5  

consensusID : consensus_7341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1102
fasta sequence
                              [CGAAAGCAAAGTACCTGGTTCAAGAAAACGAAAACTACCTGATCATCAAAATGATTCTGCCACGGTAAAATCAGCCAAGGTATCAAAACCTAATCCTACATCCCATGGGACATTTGTTCCACACGATCCATCGAAAAATGAGTTTACAGTATTTGTAAGTAATCTTGATTATTCAGTCAGTGAGG-ACA-AATTCAGCA--TACTTTTGAAAAGTGTGGAAATGTGACATCTGTTCGTCTTGTACGTGATTACGCTGGTCGGTCGAAAGGATTCGCCTATGTTGAATTCGAAAACAAAGAGTCTGTAAAGACTGCACTTACACTGGATAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTGTCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAACTCCAAAACCACCTAATTGTTATGATCGTCCAATGTTTGTATCGATATGTGATCCAAGCAGACTTAAATCATGTGGATTTAAATATACGGTTGGCAAAAAAGAACCGGAAAAGTTGTTTGTGCGGAATTTAGATAAAACTGTAAAAAACGAAGATTTGGAAATGTTGTTCAAACAGTATGGAAATATTGTGAGTGTTCGTCTGGCAACATATCGTAATGGTGTCCCAAAAGGTCATGCCTACATTGAATTCACAAATGCAGATGATGCCAGTAAAGCATTGGTTGCCACAAATGGCTTAGAATTCAGAAATAAAATATTGTCAGTATCTATTAGTGAACCACCTGTACGTGGTGAAAGTGGTCCGCAGGGCTCCAAATCAATTACATCAACAGAAGACAAAAAAGTGTTCAAAACCCCCCAAAATATTGGTTTAAGTAGCTCTCATTCCGTCGGAACTAGTGTACGGAAATCACGAACACAGTTAGAATTTTTGCCGCGTGCAGTTCATCGAACACGTGAAATTCAAGATCCAGTGTCAGAAATTCCGATGGATACTGAAAATACCGACTCTGAATCATCCACTGTTACTGGTAGTAAGGATAATGAGTATTTTCGAAGACTATTGAAGTGAAGCAAGACTCAACTTTNTTTC-TGTAAATTCCTGAATAANCAA-TTTTATANNTAACCCTAAT]

[+] EMBL CD165681             [CGAAAGCAAAGTACCTGGTTCAAGAAAACGAAAACTACCTGATCATCAAAATGATTCTGCCACGGTAAAATCAGCCAAGGTATCAAAACCTAATCCTACATCCCATGGGACATTTGTTCCACACGATCCATCGAAAAATGAGTTTACAGTATTTGTAAGTAATCTTGATTATTCAGTCAGTGAGGAACA AATTCAGCA  TACTTTTGAAAAGTGTGGAAATGTGACATCTGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD116771             [                                                                                                                                          TGAGTTTACAGTATTTGTAAGTAATCTTGATTATTCAGTCAGTGAGGAACA AATTCAGCA  TACTTTTGAAAAGTGTGGAAATGTGACATCTGTTCGTCTTGTACGTGATTACGCTGGTCGGTCGAAAGGATTCGCCTATGTTGAATTCGAAAACAAAGAGTCTGTAAAGACTGCACTTACACTGGATAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTGTCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD081203             [                                                                                                                                                                                   tcGAGG CCATAATTCGGCACGCAGGTTTGAAAAGTGTGGAAATGTGACATCTGTTCGTCTTGTACGTGATTACGCTGGTCGGTCGAAAGGATTCGCCTATGTTGAATTCGAAAACAAAGAGTCTGTAAAGACTGCACTTACACTGGATAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTGTCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAACTCCAAAACCACCTAATTGTTATGATCGTCCAATGTTTGTATCGATATGTGATCCAAGCAGACTTAAATCATGTGGATTTAAATATACGGTTGGCAAAAAAGAACCGGAAAAGTTGTTTGTGCGGAATTTAGATAAAACTGTAAAAAACGAAGATTTGGAAATGTTGTTCAAACAGTATGGAAATATTGTGAGTGTTCGTCTGGCAACATATCGTAATGGTGTCCCAAAAGGTCATGCCTACATTGAATTCACAAATGCAGATGATGCCAGTAAAGCATTGGTTGCCACAAATGGCTTAGAATTCAGAAATAAAATATTGTCAGTATCTATTAGTGAACCACCTGTACGTGGTGAAAGTGGTCCGCAGGGCTCCAAATCAATTACATCAACAGAAGACAAAAAAGTGTTCAAAACCCCCCAAAATATTGGTTTAAGTAGCTCTCATTCCGTCGGAACTAGTGTACGGAAATCACGAACACAGTTAGAATTTTTGCCGCGTGCAGTTCATCGAACACGTGAAATTCAAGATCCAGTGTCAGAAATTCCGATGGATACTGAAAATACCGACTCTGAATCATCCACTGTTACTGGTAGTAAGGATAATGAGTATTTTCGAAGACTATTGAAGTGAAGCAAGACTCAACTTTNTTTC TGTAAATTCCTGAATAANCAA TTTTATANNTAACCCTA  ]
[-] EMBL CD202777             [                                                                                                                                                                                                                                             TCTTGTACGTGATTACGCTGGTCGGTCGAAAGGATTCGCCTATGTTGAATTCGAAAACAAAGAGTCTGTAAAGACTGCACTTACACTGGATAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTGTCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAACTCCAAAACCACCTAATTGTTATGATCGTCCAATGTTTGTATCGATATGTGATCCAAGCAGACTTAAATCATGTGGATTTAAATATACGGTTGGCAAAAAAGAACCGGAAAAGTTGTTTGTGCGGAATTTAGATAAAACTGTAAAAAACGAAGATTTGGAAATGTTGTTCAAACAGGA GAAAATATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD075033             [                                                                                                                                                                                                                                                                                                                                       TAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTGTCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAACTCCAAAACCACCTAATTGTTATGATCGTCCAATGTTTGTATCGATATGTGATCCAAGCAGACTTAAATCATGTGGATTTAAATATACGGTTGGCAAAAAAGAACCGGAAAAGTTGTTTGTGCGGAATTTAGATAAAACTGTAAAAAACGAAGATTTGGAAATGTTGTTCAAACAGTATGGAAATATTGTGAGTGTTCGTCTGGCAACATATCGTAATGGTGTCCCAAAAGGTCATGCCTACATTGAATTCACAAATGCAGATGATGCCAGTAAAGCATTGGTTGCCACAAATGGCTTAGAATTCAGAAATAAAATATTGTCAGTATCTATTAGTGAACCACCTGTACGTGGTGAAAGTGGTCCGCAGGGCTCCAAATCAATTACATCAACAGAAGACAAAAAAGTGTTCAAAACCCCCCAAAATATTGGTTTAAGTAGCTCTCATTCCGTCGGAACTAGTGTACGGAAATCACGAACACAGTTAGAATTTTTGCCGCGTGCAGTTCATCGAACACGTGAAATTCAAGATCCAGTGTCAGAAATTCCGATGGATACTGAAAATACCGACTCTGAATCATCCACTGTTACTGGTAGTAAGGATAATGAGTATTTTCGAAGACTATTGAAGTGAAGCAAGACTCAACTTT TTTCTTGTAAATTCCTGAATAA CAATTTTTATAAAAAACCCctat]


>consensus_7341#0 CGAAAGCAAAGTACCTGGTTCAAGAAAACGAAAACTACCTGATCATCAAAATGATTCTGC CACGGTAAAATCAGCCAAGGTATCAAAACCTAATCCTACATCCCATGGGACATTTGTTCC ACACGATCCATCGAAAAATGAGTTTACAGTATTTGTAAGTAATCTTGATTATTCAGTCAG TGAGGACAAATTCAGCATACTTTTGAAAAGTGTGGAAATGTGACATCTGTTCGTCTTGTA CGTGATTACGCTGGTCGGTCGAAAGGATTCGCCTATGTTGAATTCGAAAACAAAGAGTCT GTAAAGACTGCACTTACACTGGATAGACAAGGAATTACACGTCCGACCTCAGAAAGTGTG TCATGTGACGCTGATACACAAAAGCAAAAAGAAGAGGATAATTCAGCAACTCCAAAACCA CCTAATTGTTATGATCGTCCAATGTTTGTATCGATATGTGATCCAAGCAGACTTAAATCA TGTGGATTTAAATATACGGTTGGCAAAAAAGAACCGGAAAAGTTGTTTGTGCGGAATTTA GATAAAACTGTAAAAAACGAAGATTTGGAAATGTTGTTCAAACAGTATGGAAATATTGTG AGTGTTCGTCTGGCAACATATCGTAATGGTGTCCCAAAAGGTCATGCCTACATTGAATTC ACAAATGCAGATGATGCCAGTAAAGCATTGGTTGCCACAAATGGCTTAGAATTCAGAAAT AAAATATTGTCAGTATCTATTAGTGAACCACCTGTACGTGGTGAAAGTGGTCCGCAGGGC TCCAAATCAATTACATCAACAGAAGACAAAAAAGTGTTCAAAACCCCCCAAAATATTGGT TTAAGTAGCTCTCATTCCGTCGGAACTAGTGTACGGAAATCACGAACACAGTTAGAATTT TTGCCGCGTGCAGTTCATCGAACACGTGAAATTCAAGATCCAGTGTCAGAAATTCCGATG GATACTGAAAATACCGACTCTGAATCATCCACTGTTACTGGTAGTAAGGATAATGAGTAT TTTCGAAGACTATTGAAGTGAAGCAAGACTCAACTTTNTTTCTGTAAATTCCTGAATAAN CAATTTTATANNTAACCCTAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)