Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7367 cluster # 7367       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7367#0 length = 721 sequences # 5  

consensusID : consensus_7367#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 721
fasta sequence
                              [AGGTGTTCC-CTACTGCTACTACCACTACTAATTATCCATCTATTTCTACACCTTGTGATTTATCAGTTGCCCCAAAACGTTCAGTACCCCTTTCTGTCCAACAAGCTTTAAGTTGTCGACCATACTTGGAGAATATTTCGAAACCTAATACATCGTTGTTAGTCAGCAAGGTACCCTCTGACAATAACAAAACTATGAAGCACTACTCATCTAACTCCTTAATCCCACGCGTCATAATTAGTAAAGAGTATAGAAAAAGGCATTCAACAAACCCAGAAGCTCTTTCACAAGTATCAAAGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGATTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATCTGAAGACAATTAAATATGTGACAGTCATTCATTTTGTCGTTCATAATCTTCCAGGTATGATTAGTGAATATGCTGCTGATAATTAATTGGATCATTACTGTACACTATATCTTCAAAGAGGGTTCTG-AAGA-TTAAAGAATTGAATGGGATTTATCTTGTGGATATTTNTGAATATTTCTTTCTGTTTTCTTTGGACTAACTTCGCACATATTTTGTTTTCCTTGATGAAATGACC-AATATAAGAGCATT]

[+] EMBL CD082974             [AGGTGTTCC CTACTGCTACTACCACTACTAATTATCCATCTATTTCTACACCTTGTGATTTATCAGTTGCCCCAAAACGTTCAGTACCCCTTTCTGTCCAACAAGCTTTAAGTTGTCGACCATACTTGGAGAATATTTCGAAACCTAATACATCGTTGTTAGTCAGCAAGGTACCCTCTGACAATAACAAAACTATGAAGCACTACTCATCTAACTCCTTAATCCCACGCGTCATAATTAGTAAAGAGTATAGAAAAAGGCATTCAACAAACCCAGAAGCTCTTTCACAAGTATCAAAGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGATTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATCTGAAGACAATTAAATATGTGACAGTCATTCATTNTGTCGTTCATAATCTTCCAGGTATGATTAGTGAATATGCTGCTGATAATTAATTGGATCATTACTGTACACTATATCTT                                                                                                                                           ]
[+] EMBL CD082824             [   TGTTCCACTACTGCTACTACCACTACTAATTATCCATCTATTTCTACACCTTGTGATTTATCAGTTGCCCCAAAACGTTCAGTACCCCTTTCTGTCCAACAAGCTTTAAGTTGTCGACCATACTTGGAGAATATTTCGAAACCTAATACATCGTTGTTAGTCAGCAAGGTACCCTCTGACAATAACAAAACTATGAAGCACTACTCATCTAACTCCTTAATCCCACGCGTCATAATTAGTAAAGAGTATAGAAAAAGGCATTCAACAAACCCAGAAGCTCTTTCACAAGTATCAAAGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGATTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATCTGAAGACAATTAAATATGTGACAGTCATTCATTTTGTCGTTCATAATCTTCCAGGTATGATTAGTGAATATGCTGCTGATAATTAATTGGATCATTACTGTACACTATATCTTCAAAGAGGGTTCTGAAAGA TTAAAGAATTGAATGGGATTTATCTTGTGGATATTNNTGAATATTTCTTTCTGGTTTCTTTGGACTAACTTCGCACATATTTTGGTTNCCTTGATGAAATGACC AATATTAGAGCATT]
[-] EMBL CD076558             [                                                                                                                                                                          GGTACCCTCTGACAATAACAAAACTATGAAGCACTACTCATCTAACTCCTTAATCCCACGCGTCATAATTAGTAAAGAGTATAGAAAAAGGCATTCAACAAACCCAGAAGCTCTTTCACAAGTATCAAAGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGATTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATTTGAAGACAATTAAATATGTGACAGTCATTCATTTTGTCGTTCATAATCTTCCAGGTATGATTAGTGAATATGCTGCTGATAATTAATTGGATCATTACTGTACCCTATATCTTCAAAGAGGGTTTTG AAGATTTAAAGAATTGAATGGGATTTATCTTGTGGATATTTTTGAATATTTCTTTCTGTTTTCTTTGTACTAACTTCGCACATATTTTGTTTTCCTTGATGAAATGACCAAATATAAGAGCATT]
[+] EMBL AA952780             [                                                                                                                                                                                                                                                                                        CTCTTTCACAAGTATCTTAGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGA TGTA TTCA CGTTCGAA TCGAAACGACA TGTAAACA CCTTCAGAA CTGAAGACAAT  AATGTG                                                                                                                                                                                                                                          ]
[-] EMBL AW017238             [                                                                                                                                                                                                                                                                                                          AGTCAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAACAAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGATTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATCTGAAGACAATTAAATATGTGACAGTCATTCATTTTGTCGTTCATAATCTTCCAGGTATGATTAGTGAATATGCTGCTGATAATTAATTGGATCATTACTGTACACTATATCTTCAAAGAGGGTTCTG AAGATTTAAAGAATTGAATGGGATTTATCTTGTGGATATTTGTGAATATTTCTTTCTGTTTTCTTTGAACTAACTTCGCACATATTTTGTTTTCCTTGATGAAATGACCAAATATAAG      ]


>consensus_7367#0 AGGTGTTCCCTACTGCTACTACCACTACTAATTATCCATCTATTTCTACACCTTGTGATT TATCAGTTGCCCCAAAACGTTCAGTACCCCTTTCTGTCCAACAAGCTTTAAGTTGTCGAC CATACTTGGAGAATATTTCGAAACCTAATACATCGTTGTTAGTCAGCAAGGTACCCTCTG ACAATAACAAAACTATGAAGCACTACTCATCTAACTCCTTAATCCCACGCGTCATAATTA GTAAAGAGTATAGAAAAAGGCATTCAACAAACCCAGAAGCTCTTTCACAAGTATCAAAGT CAACAAATCCTATTTCTGTTGGTGAATTAAAACGATTAGCCTATTCATTAGGTCCCAAAC AAGGACCAAGTTTACCTCCAACACAAGACCAAAGAGGAAATATTATTGATCAAACAAGGA TTGTATTTCATCGTTCGAATTCGAAACGACATTGTAAACATCCTTCAGAATCTGAAGACA ATTAAATATGTGACAGTCATTCATTTTGTCGTTCATAATCTTCCAGGTATGATTAGTGAA TATGCTGCTGATAATTAATTGGATCATTACTGTACACTATATCTTCAAAGAGGGTTCTGA AGATTAAAGAATTGAATGGGATTTATCTTGTGGATATTTNTGAATATTTCTTTCTGTTTT CTTTGGACTAACTTCGCACATATTTTGTTTTCCTTGATGAAATGACCAATATAAGAGCAT T



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)