Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7517 cluster # 7517       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7517#0 length = 536 sequences # 5  

consensusID : consensus_7517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 536
fasta sequence
                              [CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCACGGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAATCCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAGGAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT-CC-CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA]

[+] EMBL CD112464             [CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCACGGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAATCCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAGGAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAACTCTAATTC                                                                                                                                 ]
[-] EMBL CD149374             [                                                                                                                                                                                                 ACATGGTAATCAACAACATTTAAGTGCATCATCTACTTCCTNTTTGCCAAATTTTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAATCCC CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGG                           ]
[-] EMBL CD178355             [                                                                                                                                                                                                        AATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT CC CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA]
[-] EMBL CD149358             [                                                                                                                                                                                                                                  TACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT CCGCAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGG                           ]
[-] EMBL CD149398             [                                                                                                                                                                                                                                                                                                                                                        CGTTATCGTAGACAAACAAAAGTTGTTTCCCCAGACAAATCAATTTGTAGTCATAATTGTAATTCTCAGTATTGTCATCACGACAAACAAATCCC CAGTACTTCCAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGT                               ]


>consensus_7517#0 CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCAC GGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAAT CCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAG GAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGC CAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAG ATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAA CAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTC ATCACGACAAACAAATCCCAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGC TGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)