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Schistosoma mansoni
cluster # 7533 cluster # 7533       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7533#0 length = 1113 sequences # 5  

consensusID : consensus_7533#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1113
fasta sequence
                              [ACTGTTATATCCAAATCGCTTTACGGGGTTAGCTATAAAGTCGCTACGTCACTAAAACAGTCATGGCTGTGATTTCAGATATAAGAAAGCCTAAGACGCATAAAGGAAAAAGAGTCTTGGAGCGAAGAGCTCCTAAATTAGTTGAGAATGACAAATGCACCCTTGTTATAAAGGGTGGCCACACAAGTGAAATTGTTAATACGTTTCTCAATGATTTATGCGCCTTGAAAAAACCACTTGTTTACCGTTTAAAATGGAAAAATAGAATCCTCCCCTTCGAAGACTTATCATTTATCGAGAAAATGTGCATCAAGTTCGACTGCTCAATGTTTGTTGTTGGGATGCATTCCAAGAAAAGGCCGCATAACATTATTTTTGGAAGGCTGCACGATGGTGAGCTACTAGATATGTTTGAGCTTGGCATAAAAATGTACAAACCGATATCGGATTGTAAAGACAAAACTCTTATATATGGAGCTAAGCCCATGTTAATGTTTTCTGGAGAGTTGTTCAACTTAGACACAAAATATATGACCTTAAAGTCTTTGTTAATAGATCTTTTTAAGGGCCCAACAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTTGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGAAAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAAAGACTCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACTTCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTACCCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTAGCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTGGAGAATTTACGACCTGGATCTACCATACGAACTGCTCTGACCGGGCATCGAAAACGTGGTTTTGAACGAATAAAATCTGGTGTTAGAAAATCTAAAAAAACTTCAGTTCCCGTTGACCTTAGTGCTAGCAAACGGCGTAAACTGTTTACTGATGCTTAACCAAATATACTCT]

[+] EMBL CD082132             [ACTGTTATATCCAAATCGCTTTACGGGGTTAGCTATAAAGTCGCTACGTCACTAAAACAGTCATGGCTGTGATTTCAGATATAAGAAAGCCTAAGACGCATAAAGGAAAAAGAGTCTTGGAGCGAAGAGCTCCTAAATTAGTTGAGAATGACAAATGCACCCTTGTTATAAAGGGTGGCCACACAAGTGAAATTGTTAATACGTTTCTCAATGATTTATGCGCCTTGAAAAAACCACTTGTTTACCGTTTAAAATGGAAAAATAGAATCCTCCCCTTCGAAGACTTATCATTTATCGAGAAAATGTGCATCAAGTTCGACTGCTCAATGTTTGTTGTTGGGATGCATTCCAAGAAAAGGCCGCATAACATTATTTTTGGAAGGCTGCACGATGGTGAGCTACTAGATATGTTTGAGCTTGGCATAAAAATGTACAAACCGATATCGGATTGTAAAGACAAAACTCTTATATATGGAGCTAAGCCCATGTTAATGTTTTCTGGAGAGTTGTTCAACTTAGACACAAAATATATGACCTTAAAGTCTTTGTTAATAGATCTTTTTAAGGGCCCAACAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD075747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTTGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGAAAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAAAGACTCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACTTCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTACCCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTAGCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTGGAGAATTTACGACCTGGATCTACCATACGAACTGCTCTGACCGGGCATCGAAAACGTGGTTTTGAACGAATAAAATCTGGTGTTAGAAAATCTAAAAAAACTTCAGTTCCCGTTGACCTTAGTGCTAGCAAACGGCGTAAACTGTTTACTGATGCTTAACCAAATATACTCT]
[+] EMBL CD159578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTTGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGAAAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAAAGACCCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACTTCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTACCCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTAGCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTGGAGAATT                                                                                                                                                                     ]
[-] EMBL CD159696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTNGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGAAAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAAAGACTCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACTTCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTACCCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTAGCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTG                                                                                                                                                                            ]
[-] EMBL BF936182             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGTTGAGAAGATAAGAACATTAGGTGTTGAACACCAGTTCCACTTTATTTTGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGAAAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAAAGACTCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACTTCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTACCCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTAGCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTGGAGAATTTACGACCTGGATCTACCATACGAACTGCTCTGACCGGGCATCGAAAACGTGGTTTTGAACGAATAAAATCTGGTGTTAGAAAATCTAAAAAAACTTCAGTTCCCGTTGACCTTAGTGCTAGCAAACGGCGTAAACTGTTTACTGATGCTTAACCAAATATACTCT]


>consensus_7533#0 ACTGTTATATCCAAATCGCTTTACGGGGTTAGCTATAAAGTCGCTACGTCACTAAAACAG TCATGGCTGTGATTTCAGATATAAGAAAGCCTAAGACGCATAAAGGAAAAAGAGTCTTGG AGCGAAGAGCTCCTAAATTAGTTGAGAATGACAAATGCACCCTTGTTATAAAGGGTGGCC ACACAAGTGAAATTGTTAATACGTTTCTCAATGATTTATGCGCCTTGAAAAAACCACTTG TTTACCGTTTAAAATGGAAAAATAGAATCCTCCCCTTCGAAGACTTATCATTTATCGAGA AAATGTGCATCAAGTTCGACTGCTCAATGTTTGTTGTTGGGATGCATTCCAAGAAAAGGC CGCATAACATTATTTTTGGAAGGCTGCACGATGGTGAGCTACTAGATATGTTTGAGCTTG GCATAAAAATGTACAAACCGATATCGGATTGTAAAGACAAAACTCTTATATATGGAGCTA AGCCCATGTTAATGTTTTCTGGAGAGTTGTTCAACTTAGACACAAAATATATGACCTTAA AGTCTTTGTTAATAGATCTTTTTAAGGGCCCAACAGTTGAGAAGATAAGAACATTAGGTG TTGAACACCAGTTCCACTTTATTTTGTCGTCAGACAAGAATCTGTGTCTTCGCGTCCGGA AAATAACTTTGTCAACAAAAGGCAAAACCAACTCAACTGAACTCAGTGTGCCACCTCTAA AGACTCCAGATGGGAAAGTGGTTCAGATTTCACTTGAAGATGCTACCCCAAGTGCTGACT TCGATCTACGACGAGTATCTTTGCCGTCCGAGGACAAATGGAAACGAGCTCACCGTGTAC CCCCTGAAGTTATGAAAGGTGACAAAACGCCTAAAAATAAATCTGTCGATGTTTTCGGTA GCCGAATAGGACGAGTTCATGTTGGCAAGTCTTCTGAACTGGAGAATTTACGACCTGGAT CTACCATACGAACTGCTCTGACCGGGCATCGAAAACGTGGTTTTGAACGAATAAAATCTG GTGTTAGAAAATCTAAAAAAACTTCAGTTCCCGTTGACCTTAGTGCTAGCAAACGGCGTA AACTGTTTACTGATGCTTAACCAAATATACTCT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)