cluster # 7557

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Schistosoma mansoni
cluster # 7557 cluster # 7557 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7557#0 length = 438 sequences # 5

consensusID : consensus_7557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 438
fasta sequence

                              [CAAGTTTATGAAATAGTTATTTTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGAAGAAAACCGATTACAGTAAATCAATCAATTAACCAAGGTATAGATG-AATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCAGGGTATG-CCACGATGTAATTCATGGGAATTCTGTA-AATGTGATTTGGGTTCTTTGT-TTCCACTGTTTACTACTTGGAATGATGAATCCAAGATTTCAGTACTAGAAGATTTTGAATGGTTTGAAGATTCAACGTAAGAAATGTTTTTTGACTTACTGCTGACTGAAGAATAGTCAGCACTGTGATTTGATGTATGCATAAGTACATTCACATTAAACATCTTATTGTTACTTGCCTGATCTGCATCACCAGCAGCCCCTCG]

[-] EMBL AI739674             [CAAGTTTATGAAATAGTTATTTTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGAAGAAAACCGATTACAGTAAATCAATCAATTAACCAAGCTATAGATGCAATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCAGCTTATGCCCACGATGTAATTCATGGGAATTCTGTA AATGTGATTTGGGTTCTTTGT TTCCACTGTTTACTACTTGGAATGATGAATCCAAGATTTCAGTACTAGAAGATTTTGAATGGTTTGAAGATTCAACGTAAGAAATGTTTTTTGACTTACTACTGACTGAAGAGTAGTCAGCA                                                                                   ]
[+] EMBL AI977650             [   GTTTATGAAATAGTTATTTTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGAAGAAAACCGATTACAGTAAATCAATCAATTAACCAAGGTATAGATG AATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCAGGGTATG CCACGATGTAATTCATGGGAATTCTGTA AATGTGATTTGGGTTCTTTGT TTCCACTGTTTACTACTTGGAATGATGAATCCAAGATTTCAGTACTAGAAGATTTTGAATGGTTTGAAGATTCAACGTAAGAAATGTTTTTTGACTTACTGCTGACTGAAGAATAGTCAGCACTGTGATTTGATGTATGCATAAGTACATTCACATTAAACATCTTATTGTTACTTGCCTGATCTGCATCACCAGCAGCCCCTCG]
[+] EMBL AW017157             [   GTTTATGAAATAGTTATTTTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGAAGAAAACCGATTACAGTAAATCAATCAATTAACCAAGGTATAGATG AATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCAGGGTATG CCACGATGTAATTCATGGGAATTCTGTA AATGTGATTTGGGTTCTTTGT TTCCACTGTTTACTACTTGGAATGATGAATCCAAGATTTCAGTACTAGAAGATTTTGAATGGTTTGAAGATTCAACGTAAGAAATGTTTTTTGACTTACTGCTGACTGAAGAATAGTCAGCACTGTGATTTGATGTATGCATAAGTACATTCACATTAAACATCTTATTGTTACTTGCCTGATCTGCATCACCAGCAGCCCCTCG]
[+] EMBL AI977499             [   GTTTATGAAATATATATTGTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGTAGAAAACCGATTACAGCAAATCAATCAATTAACCAAGGGATATATG AATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCACGGTATG CCACGAAGTAATTCATGGGAATTCTGTAGAATGAGATTTGGGTTCTTTGTGTTCCACTGATTACTACTT                                                                                                                                                                                           ]
[-] EMBL SM7471               [    tcTATGAAATAGTTATTTTATATGCGTAAATGATGAATACAGTTCATGACAAGTAATGTTTGAAAACAAAATAATCTATGGAAGTANNCCGATNACAGTAAATCAATCAATTAACCAAGGTATAGATG AATGCAAACTTGGAGT                                                                                                                                                                                                                                                                                                     ]




>consensus_7557#0
CAAGTTTATGAAATAGTTATTTTAAATGCGTAAATGATGAATACAGTTCATGACAAGTAA
TGTTTGAAAACAAAATAATCTATGGAAGAAAACCGATTACAGTAAATCAATCAATTAACC
AAGGTATAGATGAATGCAAACTTGGAGTGAGTTATAAGTGTTGATCCTCTAATATCAGGG
TATGCCACGATGTAATTCATGGGAATTCTGTAAATGTGATTTGGGTTCTTTGTTTCCACT
GTTTACTACTTGGAATGATGAATCCAAGATTTCAGTACTAGAAGATTTTGAATGGTTTGA
AGATTCAACGTAAGAAATGTTTTTTGACTTACTGCTGACTGAAGAATAGTCAGCACTGTG
ATTTGATGTATGCATAAGTACATTCACATTAAACATCTTATTGTTACTTGCCTGATCTGC
ATCACCAGCAGCCCCTCG

clustalw multiple alignements is not computed in this case