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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7597 cluster # 7597       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7597#0 length = 824 sequences # 5  

consensusID : consensus_7597#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 824
fasta sequence
                              [GTTTGGCGGTGATTAGGAACCATTCGTTTCTCTGTCATAAGACCCCTTCTCATGTAGCGCAGGTTTTCTATCAATGCTCAAATGGCATTTTGTGGACTATGCTGAACGACCCATGGAAAAAGTACATAATCAAGATAAAATGTGAGAAAAATATTACTACGGAACAACCTAACAATCCATCAGTCATATATCTTTGTCGTATTTGTTCCGGTTTTCGAACAGATAGTGAATCTTTAGTTGAAGCTCACCTTGTCGATAGACACCAGATTCAGAGTAAAATGTATTCAGAACTGTGTTCATGTGATGACTCAAATGATGCCAATCAAATTGCTCTGGAATCAGTATTAACCACTGATAATTCAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAATTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTTTAAGAGAATTGAACAGCACGCGTAAG-AAGATTACGATCACTTTAAATAGCTCACCGCCACTACCTACAACAGCACCGAATGTTTCAGAACTTCAAAATCCACAAAAAGCTGTGGGTACATCC-GGTGGAGACGATGAATCTACTTCGTCTTTGGTATATCGAGCCTTCTTATCCTCATCTAATTCACCGAAAAATCCAATAAACTCTTCGTTGAAGCATAAATGTCCTGATTGTAACCGTTGTTTTAGTAGCTATAAAGCATTTGAACGTCACACTCTTCGACCG]

[+] EMBL CD179132             [GTTTGGCGGTGATTAGGAACCATTCGTTTCTCTGTCATAAGACCCCTTCTCATGTAGCGCAGGTTTTCTATCAATGCTCAAATGGCATTTTGTGGACTATGCTGAACGACCCATGGAAAAAGTACATAATCAAGATAAAATGTGAGAAAAATATTACTACGGAACAACCTAACAATCCATCAGTCATATATCTTTGTCGTATTTGTTCCGGTTTTCGAACAGATAGTGAATCTTTAGTTGAAGCTCACCTTGTCGATAGACACCAGATTCAGAGTAAAATGTATTCAGAACTGTGCTCATGTGATGACTCAAATGATGCCAATCAAATTGCTCTGGAATCAGTATTAACCACTGATAATTCAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAGATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAATTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTTTAAGAGAAATG ACAGCACGCGTAAGAAAGA TACGATCACTTTTAATAGCTCACCGCCACTACCTANCACAGCACCCGATGTTTCAGAACTTCAAAATCCACANAAAGCTGTGGGTACATCCGGGTGGAGACGATGAATCTACTTCGGCCTTGG                                                                                                                                   ]
[-] EMBL CD202202             [                  ACCATTCGTTTCTCTGTCATAAGACCCCTTCCCATGTAGCGCAGGTTTTCTATCAATGCTCAAATGGCATTNTGTGGACTATGCTGAACGACCCATGGAAAAAGTACATAATCAAGATAAAATGTGAGAAAAATATTACTACGGAACAACCTAACAATCCATCAGTCATATATCTTTGTCGTATTTGTTCCGGTTTTCGAACAGATAGTGAATCTTTAGTTGAAGCTCACCTTGTCGATAGACACCAGATTCAGAGTAAAATGTATTCAGAACTGTGTTCATGTGATGACTCAAATGATGCCAATCAAATTGCTCTGGAATCAGTATTAACCACTGATAATTCAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAATTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTTTAAGAGAATTGAACAGCACGCGTAAG AAGATTACGATCACTTTAAATAGCTCACCGC                                                                                                                                                                                                                                    ]
[+] EMBL CD195269             [                                                                                                                                                                                                                                                                                            TCAGAACTGTGTTCATGTGATGACTCAAATGATGCCAATCAAATTGCTCTGGAATCAGTATTAACCACTGATAATTCAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAATTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTTTAAGAGAATTGAACAGCACGCGTAAG AAGATTACGATCACTTTAAATAGCTCACCGCCACTACCTACAACAGCACCGAATGTTTCAGAACTTCAAAATCCACAAGAAGCTGTGGGTACATCC GGTGGAGACGATGAATCTACTTCGTCTTTGGTATATCGAGCCTTCTTATCCTCATCTAATTCACCGAAAAATCCAATAAACTCTTCGTTGAAGCATAAATGTCCTGATTGTAACCGTTGTTTTAGTAGCTATAAAGCATTTGAACGTCACACTCTTCGACCG]
[+] EMBL CD166941             [                                                                                                                                                                                                                                                                                                                                           tgTGGAAGCAGCATTAACCACTGATAATTCAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCACACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAATT                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD194695             [                                                                                                                                                                                                                                                                                                                                                                            CTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGTATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTACCAACGATCTAAGTTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTTTAAGAGAATTGAACAGCACGCGTAAG AAGATTACGATCACTTTAAATAGCTCACCGCCACTACCTACAACAGCACCGAATGTTTCAGAACTTCAAAATCCACAAAAAGCTGTGGGTACATCC GGTGGAGACGATGAATCTACTTCGTCTTTGGTATATCGAGCCTTCTTATCCTCATCTAATTCACCGAAAAATCCAATAAACTCTTCGTTGAAGCATAAATGTCCTGATTGTAACCGTTGTTTTAGTAGTTATAAAGCATTTGAACG                ]


>consensus_7597#0 GTTTGGCGGTGATTAGGAACCATTCGTTTCTCTGTCATAAGACCCCTTCTCATGTAGCGC AGGTTTTCTATCAATGCTCAAATGGCATTTTGTGGACTATGCTGAACGACCCATGGAAAA AGTACATAATCAAGATAAAATGTGAGAAAAATATTACTACGGAACAACCTAACAATCCAT CAGTCATATATCTTTGTCGTATTTGTTCCGGTTTTCGAACAGATAGTGAATCTTTAGTTG AAGCTCACCTTGTCGATAGACACCAGATTCAGAGTAAAATGTATTCAGAACTGTGTTCAT GTGATGACTCAAATGATGCCAATCAAATTGCTCTGGAATCAGTATTAACCACTGATAATT CAACCTTCACTACTTCCGATACTAAAGGAGATCACATTTCAGACATTTTAAACACTTTGT ATTGTCAAACGTCTTATGCATCAAAATCTCCAACAAATGTCGATGAAGCTTCTCCTGTTA CCAACGATCTAAATTCACTTGATTCAATCAGTCCCCCACAGTCACCAGTTTCTCCTGTTT TAAGAGAATTGAACAGCACGCGTAAGAAGATTACGATCACTTTAAATAGCTCACCGCCAC TACCTACAACAGCACCGAATGTTTCAGAACTTCAAAATCCACAAAAAGCTGTGGGTACAT CCGGTGGAGACGATGAATCTACTTCGTCTTTGGTATATCGAGCCTTCTTATCCTCATCTA ATTCACCGAAAAATCCAATAAACTCTTCGTTGAAGCATAAATGTCCTGATTGTAACCGTT GTTTTAGTAGCTATAAAGCATTTGAACGTCACACTCTTCGACCG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)