These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7632#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 579 fasta sequence [AAATTGAGTCCTAATACTCCCCAAACGAACCCAAATGCTATTGACCGTAATGCGGGCCTGCATGCACTGGAATATGAAGAAGCTATGGAAGTCGAACAA-CCCTTGAGTGATACTTCAGAACACGATCCATCCTCAGATGCAAGTCAGGATGAACAACACCCTTGGTTTTATAATGCTAGTGTCAAAGGATGCTGCGGGACAACTTGTGAACAAACAGATGCTTCG-GTTGATG--CCTTTGACGAAAA--TGACGAAGCAAGAGCTTC-AGGAGTTATTGAAG--GTGTCTTCG--AAAACA-TT-TTACA-TCAAAAAC-AAAGTGCCGCAC-GTGGAGATGTTCGC-GTGGTTCGAGGATCAG--GAATGATTC-GT-TGTCTC-CCGTGGAAAATACTTGTGATTTTTCATCCAGCGGACGGCCAGTCGACAATTGGTGTTTTTGTACAGTGTAATGCAGACAGCGAATCTCTAACCTGGAGTTGTACTGCCATAGCAACTATTCAGTTAGTTGCTCAGAGACCGAATTGCAAGATTATAGATATGATAATTCAGCATACTTTCACGCATAAGGATAACGACTGGNGTTTCCAACAA] [+] EMBL CD123529 [AAATTGAGTCCTAATACTCCCCAAACGAACCCAAATGCTATTGACCGTAATGCGGGCCTGCATGCACTGGAATATGAAGAAGCTATGGAAGTCGAACAA CCCTTGAGTGATACTTCAGAACACGATCCATCCTCAGATGCAAGTCAGGATGAACAACACCCTTGGTTTTATAATGCTAGTGTCAAAGGATGCTGCGGGACAACTTGTGAACAAACAGATGCTTCG GTTGATG CCTTTGACGAAAA TGACGAAGCAAGAGCTTC AGGAGTTATTGAGG GTGTCTTCG AAAACA TT TTACA TCAAAAAC AAAGTGCCGCAC GTGGAGATGTTCGC GTGGTTCGAGGATCAG GAATGATTC GT TGTCTC CCGTGGAAAATACTTGTGATTT ] [+] EMBL CD186854 [ GAAGCTATGGAAGTCGAACAATCCCTTGAGTGATACTTCAGAACACGATCCATCCTCAGATGCAAGTCAGGATGAACAACACCCTTGGTTTTATAATGCTAGTGTCTAAGGATGCTGCGGGACAACTTGTGAACAAACAGATGCTTCGTGTTGATG CCTTTGACGAAAA TGACGAAGCAAGAGCTTC AGGAGTCATTGAAG GTGTCTTCG AAAACACTT TTACA TCACATAC AAAGTGCCGCAC GTGGAGATGTTCGC GTGGTTCGAGGATCAG GAATGATTCTGT TGTCTC CCGTGGAAAATACTTGTGATTTTTCATCCAGCGGACGGCCAATCGACAATTGG ] [-] EMBL CD187176 [ AAGCTATGGAAGTCGAACAA CCCTTGAGTGATACTTCAGAACACGATCCATCCTCAGATGCAAGTCAGGATGAACAACACCCTTGGTTTTATAATGCTAGTGTCAAAGGATGCTGCGGGACAACTTGTGAACAAACAGATGCTTCG GTTGATGCCCCTTTGACGAAAANNTGACGAAGCAAGAGCTTCNAGGAGTTATTGAAGNNGTGTCTTCGNNAAAACA TTNTTACATTCAAAAACNAAAGTGCCGCACNGTGGAGATGTTCGCNGTGGTTCGAGGATCAGNNGAATGATTC GTNTGTCTCNCCGTGGAAAATACTTGTGATTTTTCATCCAGCGGACGGCCAGTCGACAATTGGT ] [+] EMBL CD183202 [ ATGCAAGTCAGGATGAACAACACCCTTGGTTTTATAATGCTAGTGTCAAAGGATGCTGCGGGACAACTTGTGAACAAACAGATGCTTCG GTTGATG CCTTTGACGAAAA TGACGAAGCAAGAGCTTC AGGAGTTATTGAAG GTGTCTTCG AAAACA TT TTACA TCAAAAAC AAAGTGCCGCAC GTGGAGATGTTCGC GTGGTTCGAGGATCAG GAATGATTC GT TGTCTC CCGGTGAAAATACTTGTGATTT ] [+] EMBL CD157982 [ TCTTCG AAAACA TT TTACA TCAAAAAC AAAGTGCCGCAC GTGGAGATGTTCGC GTGGTTCGAGGATCAG GAATGATTC GT TGTCTC CCGTGGAAAATACTTGTGATTTTTCATCCAGCGGACGGCCAGTCGACAATTGGTGTTTTTGTACAGTGTAATGCAGACAGCGAATCTCTAACCTGGAGTTGTACTGCCATAGCAACTATTCAGTTAGTTGCTCAGAGACCGAATTGCAAGATTATAGATATGATAATTCAGCATACTTTCACGCATAAGGATAACGACTGGNGTTTCCAACAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||