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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7657 cluster # 7657       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7657#0 length = 755 sequences # 5  

consensusID : consensus_7657#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 755
fasta sequence
                              [TATCAATATATTTGAAGAGATACTTGGAATCCAGTCAAAAGTTAGATGAAATATGATGGTCTTGAAGCCAAGAAATCATTAAATGTATACGTATAAATGTGTGTGAAGATGTTATATAACTGAAATAACTCATGTATTTACTTGTTTTTTTAAAATATTTTCTTCTTTGTAAACGCATTTAATTTTAATATTGAAGAGTAGTTTATGTAGTTAGTGTTTTTTTTACTGTTATGTAAAATAAAATAAAAGTTAATTCCAAGTGAGAACTGTCCCATTTTCGATGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTGATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGTCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAACGTATA-TTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATCAAAATACATGCAGAATATATTTAAGATAAACATTTGATTACTTACCCAGTAG-TCAATAAATAACACANAANAGTGTAGCANTTTCAGAAATGAAATACCATTNGACA-AAGAATGTGATCAATATAATTTGCAAAAGATACTAANTACANNCAAATATT]

[+] EMBL AI977257             [TATCAATATATTTGAAGAGATACTTGGAATCCAGTCAAAAGTTAGATGAAATATGATGGTCTTGAAGCCAAGAAATCATTAAATGTATACGTATAAATGTGTGTGAAGATGTTATATAACTGAAATAACTCATGTATTTACTTGTTTTTTTAAAATATTTTCTTCTTTGTAAACGCATTTAATTTTAATATTGAAGAGTAGTTTATGTAGTTAGTGTTTTTTTTACTGTTATGTAAAATAAAATAAAAGTTAATTCCAAGTGAGAACTGTCCCATTTTCGATGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAGTTGATTTTCTGTTTTGAAAGTGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGT                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD179883             [                                                                                                                                                                                                                                                                                         TGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTGATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGTCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAACGTATA TTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATCANAATACATGCAGAA ATATTTAAGATAAACATTTGATTACTTACCCAGTAG TCAATAAATAACACANAANAGTGTAGCANTTTCAGAAATGAAATACCATTNGACA AAGAATGTGATCAATATAATTTGCAAAAGATACTAANTACANNCAAATATT]
[+] EMBL CD179997             [                                                                                                                                                                                                                                                                                         TGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTGATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGTCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAACGTATA TTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATCAAAATACATGCAGAATAT TTTAAGATAAACATTTGATTACTTA CAAGTAGTTCAATAAATAACACAAAAAAGTGTAGCAATTTCAGAAATGAAATACCATT GACANAAG ATGTGn                                         ]
[+] EMBL CD179870             [                                                                                                                                                                                                                                                                                         TGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTGATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGTCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAACGTATATTTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATCAAAATACATGCAGAAT                                                                                                                                                ]
[+] EMBL CD179910             [                                                                                                                                                                                                                                                                                         TGCGTAAACGTTGAGAAATAATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAATATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTGATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAGTCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAACGTATA TTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATC AAATACATGCAGAATA                                                                                                                                               ]


>consensus_7657#0 TATCAATATATTTGAAGAGATACTTGGAATCCAGTCAAAAGTTAGATGAAATATGATGGT CTTGAAGCCAAGAAATCATTAAATGTATACGTATAAATGTGTGTGAAGATGTTATATAAC TGAAATAACTCATGTATTTACTTGTTTTTTTAAAATATTTTCTTCTTTGTAAACGCATTT AATTTTAATATTGAAGAGTAGTTTATGTAGTTAGTGTTTTTTTTACTGTTATGTAAAATA AAATAAAAGTTAATTCCAAGTGAGAACTGTCCCATTTTCGATGCGTAAACGTTGAGAAAT AATCAAGAAATTGATTGTTCTCCTCTTTTTTTTTCAAGTTTGATTATATATACTACTCAA TATTCTCCAAACGTTATGAGTAAATAATTATTAGAAAAGGAAAGCTTACACTTAAAATTG ATTTTCTGTTTTGAAGATGATTATTTATTGTATTTGTTTCACAACTTTTCAGTATATCAG TCTCTTTCGTCAATTTTGAATATTTATGATGAAACTAATTGGGTCAGTATGTTTAGTAAC GTATATTATTCCCGTCAGGTATGACACATCTCCAGGCTCCGTATTCAAACATGAATCAAA ATACATGCAGAATATATTTAAGATAAACATTTGATTACTTACCCAGTAGTCAATAAATAA CACANAANAGTGTAGCANTTTCAGAAATGAAATACCATTNGACAAAGAATGTGATCAATA TAATTTGCAAAAGATACTAANTACANNCAAATATT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)