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Schistosoma mansoni
cluster # 7688 cluster # 7688       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7688#0 length = 1102 sequences # 5  

consensusID : consensus_7688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1102
fasta sequence
                              [TGTCGGAACAAAAGTCCGGACATTCACAAAAGCATTAAGACGTGAGCTTGGACCTGATTACGTATCTCCTGTTAAAGCTTATGGTAAACGGTTGGCAAGTCTAAACGCAACTGCCATCATAGGTGCTTTTAATTCTAAATCTCCCAGGAAAACATATGTTAGGAAAAAAAGGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCCCAAGTTGTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAACAATGAACTCTTATGTCCTATGATGATCTCGTCCGCACAAATTATTTCANACACTCAACCACAACTTATTCAATTGCCAAGTAAT]

[-] EMBL CD155836             [TGTCGGAACAAAAGTCCGGACATTCACAAAAGCATTAAGACGTGAGCTTGGACCTGATTACGTATCTCCTGTTAAAGCTTATGGTAAACGGTTGGCAAGTCTAAACGCAACTGCCATCATAGGTGCTTTTAATTCTAAATCTCCCAGGAAAACATATGTTAGGAAAAAAAGGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD200679             [                                                                                                                                                                          aGTCGGATGTATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTATTACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGATGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCCCAAGTTGTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTTTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCGCCC                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD192146             [                                                                                                                                                                                                                                                                                                                                                                 GTACTCCTGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGAAAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAGTGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTG                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD117303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTAGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAACAATGAACTCTTATGTCCTATGATGATCTCGTCCGCACAAATTATTTCANACACTCAACCACAACTTATTCAATTGCCAAGTAAT]
[+] EMBL CD116843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGACACGTTTGGCGTTCAGCAGATCATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTCTAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTTTCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACAGCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAATACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGCTTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCTTGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGCATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATCATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAAacat                                                                                 ]


>consensus_7688#0 TGTCGGAACAAAAGTCCGGACATTCACAAAAGCATTAAGACGTGAGCTTGGACCTGATTA CGTATCTCCTGTTAAAGCTTATGGTAAACGGTTGGCAAGTCTAAACGCAACTGCCATCAT AGGTGCTTTTAATTCTAAATCTCCCAGGAAAACATATGTTAGGAAAAAAAGGTCGGATGT ATCATTTGAGTTGGGATTACCACCAACTTTGGTTCATTCAGATGAAGCAGATGATGCTAT TACAGAGCCTATGTGTTCAGTCGTTGATGATGATTTAGTTCACTGTGTGGAGATTACCGA TGCCCTAACTCCAGAACAAAGCAACGTACTGACAACGCACAAGTCCCCAAGTTGTACTCC TGCGAATGAAGCCACACCATCAACGTTTAAGAACGTTTGTCAAATTAACCCTGCAATCGA AAGTTTTCATTCACAACGAATTATACCGCTAGGACATGACACGTTTGGCGTTCAGCAGAT CATGCATCAAGTGGTAGTTATGCCTCATTCGAACGAATCCTCTCCAATTATGTGTCAGTC TAAGTTGCCAGATCTCGGCACACCTGTCCCTCGTCCATCAATAGGAAGTGCAGTTCCTTT TCCTGTGTTATCCTGTCCAAAACCATATGATTGTTATTTTAATGATACCTCATTACAACA GCGACACAACCAAGTTATGTACAATCCACTTTATCCCTCCCTCCCGCCTCAGTACGTTAA TACTTGGAATCCTACGTTACCGTGTATTTCAAATTCAAGTATCACACCATCCTTTGTTGC TTGTGCACCTCCAAATATTATTCTTCCCCACGTTGGCTCACCTTTTGTTGTTCCCAACCT TGGTGTTACGCCTCAGGTCGCATATCCACTTGTTTTACAATCGTTTCCCAATATCCCTGC ATCTTATATAGGACCTAGTTTTCCCTGCGGAATTATCTCACCTGTTATTTTACCGACATC ATGGGCTCAACCTAGCTTGCTACCTTGTCAACCTTTCAATGCCTCAGCTAGCAACAACAA TGAACTCTTATGTCCTATGATGATCTCGTCCGCACAAATTATTTCANACACTCAACCACA ACTTATTCAATTGCCAAGTAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)