Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7732 cluster # 7732       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7732#0 length = 1036 sequences # 5  

consensusID : consensus_7732#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1036
fasta sequence
                              [TAGAAAAAAAAAGTGTATGTTCAGAAGCTCCTACATCTGAATCAAGTAATGCACTGGGTCGTCCTACTAGATCTAATGTTCATCGACCCCGTGTAGTAGCAGAGTTATCTCTGGCGTCCGCGATTTCATCTACTTCAGAAAACTCTTATCCAATGACACACATCGATAACCATTCACTGAATAGAAAAGTTGATGATGAAGATTACATTCCTTCTCGTTCTGAGCCATCTGATGTGAAGTACAATCGTCGTCGTTTGCTTATTCTTGCTCAAGTGGAACGTATGTTTTCAATATTATTGATCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTCGACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCATCATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCANATCAGTTGAGAATGGTCTGTCTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTTTAACGCTACATCATCTACCGACAAAAATTCAAACCAATTATTTGTCAAAATTTATTCATGATTTCCTTCGACTTCGTCAGCTTTGGCCAACTACAATGAATGAAGCTGCTTCCATATTCTATCCTCATTTACGTGAAATTATATATCAATTGAAACATATTAACGATTTCTTGAGGCTATGCTTTCCTGATGCATTAAAAATGAATTATGATTCACAGTTAACTATTCCGATAACTGATAATCTGAAGTCTCTTTTATCATGTAAACCTGGCTTATCTTTGATATTTTGTTTACTCGACGCATGTGCTCGTGCCTCCAACCCCGCTGATCCATCAGATTTTATTCAATTCGGAGCGTATTTTAGTTATGCCAATTCATTTATTGATCGTACTTGCATTAACAATACCACTGATGAATGCGATTACGTTATGGAGTCATTTCCACATTTAGCTTCCATTCTATTGTTGTATATTAAACCATCGAAATATGGTCTGTTAAC]

[+] EMBL CD185609             [TAGAAAAAAAAAGTGTATGTTCAGAAGCTCCTACATCTGAATCAAGTAATGCACTGGGTCGTCCTACTAGATCTAATGTTCATCGACCCCGTGTAGTAGCAGAGTTATCTCTGGCGTCCGCGATTTCATCTACTTCAGAAAACTCTTATCCAATGACACACATCGATAACCATTCACTGAATAGAAAAGTTGATGATGAAGATTACATTCCTTCTCGTTCTGAGCCATCTGATGTGAAGTACAATCGTCGTCGTTTGCTTATTCTTGCTCAAGTGGAACGTATGTTTTCAATATTATTGATCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTCGACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCATCATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCANATCAGTTGAGAATGGTCTGTCTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTTTAACGCTACATCATCTACCGACAAAAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD185610             [TAGAAAAAAAAAGTGTATGTTCAGAAGCTCCTACATCTGAATCAAGTAATGCACTGGGTCGTCCTACTAGATCTAATGTTCATCGACCCCGTGTAGTAGCAGAGTTATCTCTGGCGTCCGCGATTTCATCTACTTCAGAAAACTCTTATCCAATGACACACATCGATAACCATTCACTGAATAGAAAAGTTGATGATGAAGATTACATTCCTTCTCGTTCTGAGCCATCTGATGTGAAGTACAATCGTCGTCGTTTGCTTATTCTTGCTCAAGTGGAACGTATGTTTTCAATATTATTGATCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTCGACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCATCATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCANATCAGTTGAGAATGGTCTGTCTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTNTAACGCTACATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD166767             [                                                                                                                                                                                                 TGATGAAGATTACATTCCTTCTCGTTCTGAGCCATCTGATGTGAAGTACAATCGTCGTCGTTGGCTTATTCTTGCTCAAGTGGAACGTATGTTTTCAATATTATTGATCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTCGACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCATCATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCAAATCAGTTGAGAATGGTCTGTTTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTTTAACGCTACATCATCTACCGACAAAAATTCAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI975869             [                                                                                                                                                                                                                                                                                                     TTATTGATCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTCGACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCATCATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCAAATCAGTTGAGAATGGTCTGTTTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTTTAACGCTACATCATCTACCGACAAAAATTCAAACCAATTATTTGTCAAAATTTATTCATGATTTCCTTCGACTTCGTCAGCTTTGGCCAACTACAATGAATGAAGCTGCTTCCATATTCTATCCTCATTTACGTGAAATTATATATCAATTGAAACATATTAACGATTTCTTGAGGCTATGCTTTCCTGATGCATTAAAAATGAATTATGATTCACAGTTAACTATTCCGATAACTGATAATCTGAAGTCTCTTTTATCATGTAAACCTGGCTTATCTTTGATATTTTGTTTACTCGACGCATGT                                                                                                                                                                                                  ]
[+] EMBL CD064557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCAAACCAATTATTTGTCAAAATTTATTCATGATTTCCTTCGACTTCGTCAGCTTTGGCCAACTACAATGAATGAAGCTGCTTCCATACTCTATCCTCATTTACGTGAAATTATATATCAATTGAAACATATTAACGATTTCTTGAGGCTATGCTTTCCTGATGCATTAAAAATGAATTATGATTCACAGTTAACTATTCCGATAACTGATAATCTGAAGTCTCTTTTATCATGTAAACTTGGCTTATCTTTGATATTTTGTTTACTCGACGCATGTGCTCGTGCCTCCAACCCCGCTGATCCATCAGATTTTATTCAATTCGGAGCGTATTTTAGTTATGCCAATTCATTTATTGATCGTACTTGCATTAACAATACCACTGATGAATGCGATTACGTTATGGAGTCATTTCCACATTTAGCTTCCATTCTATTGTTGTATATTAAACCATCGAAATATGGTCTGTTAAC]


>consensus_7732#0 TAGAAAAAAAAAGTGTATGTTCAGAAGCTCCTACATCTGAATCAAGTAATGCACTGGGTC GTCCTACTAGATCTAATGTTCATCGACCCCGTGTAGTAGCAGAGTTATCTCTGGCGTCCG CGATTTCATCTACTTCAGAAAACTCTTATCCAATGACACACATCGATAACCATTCACTGA ATAGAAAAGTTGATGATGAAGATTACATTCCTTCTCGTTCTGAGCCATCTGATGTGAAGT ACAATCGTCGTCGTTTGCTTATTCTTGCTCAAGTGGAACGTATGTTTTCAATATTATTGA TCTTAGATGAAGTTTCCTTATCTCTCAAAAGAGTTGTTGTTCAAAATGACGCACGTTCTC GACTGTTAGATTATCAACAAGAATTGATTAATCAACTAATCAGCGAACTACTCCAATCAT CATCGATAACAAGTGAAACAACATCTAAAGAAGAATTTTTCANATCAGTTGAGAATGGTC TGTCTTCATTACCGGAAAATTTTTTTTCTATCCATAAGGGAATGCGACTATGGTGTTTAA CGCTACATCATCTACCGACAAAAATTCAAACCAATTATTTGTCAAAATTTATTCATGATT TCCTTCGACTTCGTCAGCTTTGGCCAACTACAATGAATGAAGCTGCTTCCATATTCTATC CTCATTTACGTGAAATTATATATCAATTGAAACATATTAACGATTTCTTGAGGCTATGCT TTCCTGATGCATTAAAAATGAATTATGATTCACAGTTAACTATTCCGATAACTGATAATC TGAAGTCTCTTTTATCATGTAAACCTGGCTTATCTTTGATATTTTGTTTACTCGACGCAT GTGCTCGTGCCTCCAACCCCGCTGATCCATCAGATTTTATTCAATTCGGAGCGTATTTTA GTTATGCCAATTCATTTATTGATCGTACTTGCATTAACAATACCACTGATGAATGCGATT ACGTTATGGAGTCATTTCCACATTTAGCTTCCATTCTATTGTTGTATATTAAACCATCGA AATATGGTCTGTTAAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)