These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7784#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 764 fasta sequence [ATGATGCCAGATCTCTTTA-GAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT-AAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGGCAACTGTTCAGGCAAACCGATCGGGCCATATCCCCACCACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTCTGGTAGCTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCCTGGGCAACATGAAAATACGGTAAAGACAAAAACAGA-TGACCCAGTTGTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCCTGGATTAAGCGAATATTCAACTTCAGATTCTGACCAGTCAACAGATTCGGATGATGACGAATCAACTGATGTTGAAGATGCTGTTTGTACATTACAGCAAATAGCCTGTACAAGAATACGATATGCTAAAGCTGATGGTGCCGTGGATAATGACTAAAATTTGTCCAAGCAATGTTTTCTGATGTACAGTATAACGCGAAATTTGTGACTAAATTGTATATTTCTCTCTTTAAATTTCCTTCATTGTTTCAGTCGTAATAACC] [-] EMBL CD095592 [ATGATGCCAGATCTCTTTATGAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCTAAAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGG ] [+] EMBL CD192622 [ ATGCCAGATCTCTTTATGAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT AAAAAATCGAATCCATCG ] [+] EMBL CD083500 [ g aggAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT AAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGGCAACTGTTCAGGCAAACCGATCGGGCCATATCCCCACCACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTCTGGTAGCTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCCTGGGCAACATGAAAATACGGTAAAGACAAAAACAGA TGACCCAGTTGTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCC ] [-] EMBL CD170034 [ ACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTC CTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCC GGGCAACATGAAAAT CGGTAAAGACAAAAACAGANTGACCC ] [-] EMBL SMW780 [ GTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCCTGGATTAAGCGAATATTCAACTTCAGATTCTGACCAGTCAACAGATTCGGATGATGACGAATCAACTGATGTTGAAGATGCTGTTTGTACATTACAGCAAATAGCCTGTACAAGAATACGATATGCTAAAGCTGATGGTGCCGTGGATAATGACTAAAATTTGTCCAAGCAATGTTTTCTGATGTACAGTATAACGCGAAATTTGTGACTAAATTGTATATTTCTCTCTTTAAATTTCCTTCATTGTTTCAGTCGTAATAACC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||