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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7864 cluster # 7864       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7864#0 length = 1169 sequences # 5  

consensusID : consensus_7864#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1169
fasta sequence
                              [ATGGAGTTGAACTTATACCTGCACCGCTTCTTCCGCACAAATTATCATTTAGTCCTTCAGGTCAAGCATTAAATTATTCTGCAATATCTAATTCATCTATGGATAGCGCAGCTAACACAACTATTCTTAATTCGATGTCTGATTCCCAAGCAATTCATCAATCTTCGCTTACCTTACCTCCATTAGCCCCAGCAATTCATAATCATACATGCATTGTTGGAAACACTACTTGTACACCTGGTTCTTATCAACATCATCATCATACTAATATGGCATCTCATCGAGGGGCTACTGAATCCGGGATCCATTCAGATCATGAAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACACTGTCACTAGCGTCAATAGTCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAACCAACTTCATCATCATTGTCTTCCAGACAATCCCATCTAGATTATACCAACCAAACTAATCAGAAAACTCCCTGGCGTCCTC-AAATTCATTCACATTTAAATAATCCACCACCCCCTTTATCACCTGGTCTACCAAGACGATTCGCTGATGGCATTCTACCACCTCCTGATATTTCTAACAATACAACTATCCAATATTGTTCTTCAGGTCAGTCATCCCCATCTCCAGCAGGATCTGCAACTCCGGTACCTACACCAAGACGTGAATCACTTGCTGGTACACCATCATGTCAACTAATAGTTTTACCTATAAATACTAATAATACTAATAATGTTATTATTGTCAATAGTAGTGGTGTACATCCACCACCAATTGCTACACGTCCAGAAAAAACAAAATCCATATATACTCAACCGATTGGTGGAGGAGATATCAATTCAACCGCCCAATCATTCAATAATAGTGATGATTCATCTACAAGTATTCATTCAACATCATTACAACTCCCAGATGTTTATTTACAGTCGGCGAATCCTATTTCAACAGTGAAAAAATCTAATTCTTATGAATTCGATGATGAATCTTCAACAATGTTATTACCTACCAATACATCTACTATCCCTACTATTGTAAATGATCATATTGATAAAAGTATAAATGATCAGTTAGATTTCTTAAATACAAATTCTATCTGTACAACTATGGTCCCCTTCTACTAATACTACTACTACTAATAATAATATAGTATC]

[+] EMBL CD162698             [ATGGAGTTGAACTTATACCTGCACCGCTTCTTCCGCACAAATTATCATTTAGTCCTTCAGGTCAAGCATTAAATTATTCTGCAATATCTAATTCATCTATGGATAGCGCAGCTAACACAACTATTCTTAATTCGATGTCTGATTCCCAAGCAATTCATCAATCTTCGCTTACCTTACCTCCATTAGCCCCAGCAATTCATAATCATACATGCATTGTTGGAAACACTACTTGTACACCTGGTTCTTATCAACATCATCATCATACTAATATGGCATCTCATCGAGGGGCTACTGAATCCGGGATCCATTCAGATCATGAAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACACTGTCACTAGCGTCAATAGTCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAACCAACTTCATCATCATTGTCTTCCAGACAATCCCATCTAGATTATACCAACCAAACTAATCAGAAAACTCCCTGGCGTCCTC AAATTCATTCACATTTAAATAATCCACCACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD167158             [                                        ATTATCATTTAGTCCTTCAGGGCAAGCATTAAAGGAGGCTGCAATATCTAATTCATCTATGGATAGCGCAGCTAACACAACTATTCTTAATTCGATGTCTGATTCCCAAGCAGTTCATCAATCTTCGCTTACCTTACCTCCATTAGCCCCAGCAATTCATAATCATACATGCATTGTTGGAAACACTACTTGTACACCTGGTTCTTATCAACATCATCATCATACTAATATGGCATCTCATCGAGGGGCTACTGAATCCGGGATCCATTCAGATCATGAAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACACTGTCACTAGCGTCAATAGTCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAACCAACTTCATCATCATTGTCTTCCAGACGATCCCATCTAGATTATACCAACCAAACTAATCAGAAGACTCCCTGGCGTCCTCAAAATTCATTCACATTTAAATAATCCACCACCCCCTTTATCACCTGGTCTACCAAGACGATTCGCTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BG931473             [                                                                                                                                                                                                                                                                                                              cTCCATTCAGATCATGAAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACACTGTCACTAACGTCAATAGTCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAACCAACTTCATCATCATTGTCTTCCAGACAATCCCATCTAGATTATACCAACCAAACTAATCAGAAAACTCCCTGGCGTCCTC AAATTCATTCACATCTATATAATCCACCATCCCCTTTATCACCTGTTCTACCAAGACGATTCGCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD154191             [                                                                                                                                                                                                                                                                                                                              AAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACACTGTCACTAGCGTCAATAGCCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAACCAACTTCATCATCATTGTCTTCCAGACAATCCCATCTAGATTATACCAACCAAACTAATCAGAAAACTCCCTGGCGTCCTC AAATTCATTCACATTTAAATAATCCACCACCCCCTTTATCACCTGGTCTACCAAGACGATTCGCTGATGGCATTCTACCACCTCCTGATATTTCTAACAATACAACTATCCAATATTGTTCTTCAGGTCAGTCATCCCCATCTCCAGCAGGATCTGCAACTCCGGTACCTACACCAAGACGTGAATCACTTGCTGGTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD115237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAATATTGTTCTTCAGGTCAGCCATCCCCATCTCCAGCAGGATCTGCAACTCCGGTACCTACACCAAGACGTGAATCACTTGCTGGTACACCATCATGTCAACTAATAGTTTTACCTATAAATACTAATAATACTAATAATGTTATTATTGTCAATAGTAGTGGTGTACATCCACCACCAATTGCTACACGTCCAGAAAAAACAAAATCCATATATACTCAACCGATTGGTGGAGGAGATATCAATTCAACCGCCCAATCATTCAATAATAGTGATGATTCATCTACAAGTATTCATTCAACATCATTACAACTCCCAGATGTTTATTTACAGTCGGCGAATCCTATTTCAACAGTGAAAAAATCTAATTCTTATGAATTCGATGATGAATCTTCAACAATGTTATTACCTACCAATACATCTACTATCCCTACTATTGTAAATGATCATATTGATAAAAGTATAAATGATCAGTTAGATTTCTTAAATACAAATTCTATCTGTACAACTATGGTCCCCTTCTACTAATACTACTACTACTAATAATAATATAGTATC]


>consensus_7864#0 ATGGAGTTGAACTTATACCTGCACCGCTTCTTCCGCACAAATTATCATTTAGTCCTTCAG GTCAAGCATTAAATTATTCTGCAATATCTAATTCATCTATGGATAGCGCAGCTAACACAA CTATTCTTAATTCGATGTCTGATTCCCAAGCAATTCATCAATCTTCGCTTACCTTACCTC CATTAGCCCCAGCAATTCATAATCATACATGCATTGTTGGAAACACTACTTGTACACCTG GTTCTTATCAACATCATCATCATACTAATATGGCATCTCATCGAGGGGCTACTGAATCCG GGATCCATTCAGATCATGAAATAAGATCAGTAACTATGGGCTCCTGTACTAATTTTAACA CTGTCACTAGCGTCAATAGTCGTTCTATTCCGCCCCATCCTTCTCCTTATGTGATGCAAC CAACTTCATCATCATTGTCTTCCAGACAATCCCATCTAGATTATACCAACCAAACTAATC AGAAAACTCCCTGGCGTCCTCAAATTCATTCACATTTAAATAATCCACCACCCCCTTTAT CACCTGGTCTACCAAGACGATTCGCTGATGGCATTCTACCACCTCCTGATATTTCTAACA ATACAACTATCCAATATTGTTCTTCAGGTCAGTCATCCCCATCTCCAGCAGGATCTGCAA CTCCGGTACCTACACCAAGACGTGAATCACTTGCTGGTACACCATCATGTCAACTAATAG TTTTACCTATAAATACTAATAATACTAATAATGTTATTATTGTCAATAGTAGTGGTGTAC ATCCACCACCAATTGCTACACGTCCAGAAAAAACAAAATCCATATATACTCAACCGATTG GTGGAGGAGATATCAATTCAACCGCCCAATCATTCAATAATAGTGATGATTCATCTACAA GTATTCATTCAACATCATTACAACTCCCAGATGTTTATTTACAGTCGGCGAATCCTATTT CAACAGTGAAAAAATCTAATTCTTATGAATTCGATGATGAATCTTCAACAATGTTATTAC CTACCAATACATCTACTATCCCTACTATTGTAAATGATCATATTGATAAAAGTATAAATG ATCAGTTAGATTTCTTAAATACAAATTCTATCTGTACAACTATGGTCCCCTTCTACTAAT ACTACTACTACTAATAATAATATAGTATC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)