These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 246 fasta sequence [TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATTATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATTCCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGACATCCG] [+] EMBL AI975957 [TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATTATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATTCCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGACATCCG] consensusID : consensus_787#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 142 fasta sequence [GTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATTATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAATCCATTTGTATTGATCTAT] [+] EMBL AI975773 [GTCATATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATTATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAATCCATTTGTATTGATCTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_787#0 TAATGCAGTGCAGGCATGCATTTATTTTTTTTTTTTTTTTTTTTTTAAACGTTCGCGTCA 60 consensus_787#1 --------------------------------------------------------GTCA 4 **** consensus_787#0 TATATATATATATATATATATATATAATTTATCATAAAAATATGCAGCTCATAGTTAATT 120 consensus_787#1 TATATATATATATATATATATATATAATTTATCATAAAAATATGCAGTACATTCCTAATT 64 *********************************************** *** ***** consensus_787#0 ATTAAATGGCTAAAGACGTTGTGATGATATTTTTTAATGCAAGGTGCTTCCAGAACGATT 180 consensus_787#1 ATTAAATGGCTAAAGACTTTGTGATAATATTTTTTAATGCAAGGTGCTTCCAAAACGAAT 124 ***************** ******* ************************** ***** * consensus_787#0 CCATCTGTATTGATCTATTAATTTGGCTTGCTGCTCTGAGCTAACAGGGTGATAGTTCGA 240 consensus_787#1 CCATTTGTATTGATCTAT------------------------------------------ 142 **** ************* consensus_787#0 CATCCG 246 consensus_787#1 ------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||