These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7904#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 626 fasta sequence [CACCTATTGGTCACCGATAATTAAAGAATATTT-TCAATTCTATGTGAAATTAAATCAGAAC-TGA-TTCATTCCAGTCATTACCTTCCGCTACAGAATATAAAATTATTTATTTACCAGAATATAAGTCAATGGTGGATTTGTTAAATTTATGGAATTGTAGATTACATGATTTTCTATGTCTACGTTCATCATACTCTTCTAAATCCGGTGTTGATATACCACAAACACGTTGGCTTACACTATTTATCAGTCTTATACAACATAATGAAATTCAAGTAGAGTATTTGAAATCAGTATTCACAAGTTTACTACATGATATTGAAAATGAAGATAATGAATCCATGAAAAGTGATTTAAATACTGATTAT-AATGATGATAAGAGTTACTATTTATCACAAACAATCCAAGATGAAGATAATTCATCCGACACTCGAAGAGATTCAAATGTAAGGTTGAATAAATCATCTAGAAATGAATATTTAAATGACCTGAAGAGTAGATTATTTTAGTGTGATTTTGATGATCAACATACTGTACAATTGTCACTACAGCAACCGGCATTATTAAAACCATTGATTACTTTTCCAAGTGAAAAGATGAATCAGTCATTGCAGACTGAAATAACG] [-] EMBL CD086613 [CACCTATTGGTCACCGATAATTAAAGAATATTTATCAATTCTATGTGAAATTAAATCAGAACTTGA TTCATTCCAGTCATTACCTTCCGCTACAGAATATAAAATTATTTATTTACCAGAATATAAGTCAATGGTGGATTTGTTAAATTTATGGAACTGTA ] [-] EMBL CD196154 [ t caAATTCTATGTGAAATTAAATCAGAAC TGATTTCATTCCAGTCATTACCTTCCGCTACAGAATATAAAATTATTTATNTACCAGAATATAAGTCAATGGTGGATTTGTTAAATTTATGGAATTGTAGATTACATGATTTTCTATGTCTACGTTCATCATACTCTTCTAAATCCGGTGTTGATATACCACAAACACGTTGGCTTACACTATTTATCAGTCTTATACAACATAATGAAATTCAAGTAGAGTATTTGAAATCAGTATTCACAAGTTTACTACATGATATTGAAAATGAAGATA ] [+] EMBL CD196187 [ TCCAGTCATTACCTTCCGCTACAGAATATAAAATTATTTATTTACCAGAATATAAGTCAATGGTGGATTTGTTAAATTTATGGAATTGTAGATTACATGATTTTCTATGTCTACGTTCATCATACTCTTCTAAATCCGGTGTTGATATACCACAAACACGTTGGCTTACACTATTTATCAGTCTTATACAACATAATGAAATTCAAGTAGAGTATTTGAAATCAGTATTCACAAGTTTACTACATGATATTGAAAATGAAGATAATGAATCCATGANAAGTGATTTANATACTGATTATNNATGATGAT AGAGn ] [-] EMBL CD086644 [ TCATCATACTCTTCTAAATCCGGTGTTGATATACCACAAACACGTTGGCTTACACTATTTATCAGTCTTATGCAACATAATGAAATTCAAGTAGAGTATTTGAAATCAGTATTCACAAGTTTACTACATGATATTGAAAATGAAGATAATGAATCCATGAAAAGTGATTTAAATACTGATTAT AATGATGATAAGAGTTACTATTTATCACAAACAATCCAAGATGAAGATAATTCATCCGACACTCGAAGAGATTCAAATGTAAGGTTGAATAAATCATCTAGAAATGAATATTTAAATGACCTGAAGAGTAGATTATTTTAGTGTGATTTTGATGATCAACATACTGTACAATTGTCACTACAGCAACCGGCATTATTAAAACCATTGATTACTTTTCCAAGTGAAAA ] [+] EMBL CD187177 [ TACCACAAACACGTTGGCTTACACTATTTATCAGTCTTATACAACATAATGAAATTCAAGTAGAGTATTTGAAATCAGTATTCACAAGTTTACTACATGATATTGAAAATGAAGATAATGAATCCATGAAAAGTGATTTAAATACTGATTAT AATGATGATAAGAGTTACTATTTATCACAAACAATCCAAGATGAAGATAATTCATCCGACACTCGAAGAGATTCAAATGTAAGGTTGAATAAATCATCTAGAAATGAATATTTAAATGACCTGAAGAGTAGATTATTTTCGTGTGATTTTGATGATCAACATACTGTACAATTGTCACTACAGCAACCGGCATTATTAAAACCATTGATTACTTTTCCCAGTGAAAAGATGAATCAGTCATTGCAGACTGAAATAACG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||