These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7918#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 877 fasta sequence [GACAAGAGTAGATACTCGAGCCAAGCCATATTCATTTTTCCCAACCAAGCTGACAGTATGAGTTGGTCCAATTTTACTACCAGGTGTAAACAGCAAATTATAGGCTGAATATGTTAAAATATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTAAGTACGGATATTGATCTCTTAGTTCAGTACGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCTAAAGACTCCGTTATA-AACG-AATCCAACTGACAGCTAAATGTAACAT-TTTCTCCCTCCATTACT-AAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTAAATTGTAAGTCCCAGAGTGCTCTCGGCGGATGAAATCAGGAAACTTTAATAGATAATCATTATGTCCTGGAAAATTAGATGGAATTCTTTTGCCGTCTTTGGTCCATTTGACAATCGTGTGCTCCGGATTAGATCGATATTTAGTCATTAACTTGAGACCAGTTTGTGGTCCAATTCGAACAGTAATCCTTTGTGTGAGGGGTGATAACACAGTAATTCCACTACCAATGAATGGTATATTGGAGTCATAAGTCAACAATTTAGGCCGCTCATTTGAACCACCAAAATAGGTAGAATAAACAGCTGAGGAATCCAAGTGGCTCCAGCACACCAAACCCATGTCTTTCCAAGCTGACGCTGTGCGCTTGTATAATACCAAAGTACCATTCGGAGAGACATAACTTTCGAAATAATTTGTAACATGAATGGATGTTTGACGGACTCTACGCATGCAGCCAGCAGATTGTATACCACCAGGAGAC] [+] EMBL CD185833 [GACAAGAGTAGATACTCGAGCCAAGCCATATTCATTTTTCCCAACCAAGCTGACAGTATGAGTTGGTCCAATTTTACTACCAGGTGTAAACAGCAAATTATAGGCTGAATATGTTAAAATATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTAAGTACGGATATTGATCTCTTAGTTCAGTGCGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCTAAAGACTCCGTTATA AACG AATCCAACTGACAGCTAAATGTAACAT TTTCTCCCTCCATTACT AAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTA ] [+] EMBL CD186203 [GACAAGAGTAGATACTCGAGCCAAGCCATATTCATTTTTCCCAACCAAGCTGACAGTATGAGTTGGTCCAATTTTACTACCAGGTGTAAACAGCAAATTATAGGCTGAATATGTTAAAATATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTAAGTACGGATATTGATCTCTTAGTTCAGTGCGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCTAAAGACTCCGTTATA AACG AATCCAACTGACAGCTAAATGTAACAT TTTCTCCCTCCATTACT AAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTA ] [-] EMBL CD185789 [ ACAAGAGTAGATACTCGAGCCAAGCCATATTCATTTTTCCCAACCAAGCTGACAGTATGAGTTGGTCCAATCTTACTACCAGGTGTAAACAGCAAATTATAGGCTGAATATGTTAAAATATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTAAGTACGGATATTGATCTCTTAGTTCAGTACGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCTAAAGACTCCGTTATA AACG AATCCAACTGACAGCT AATATAACAT TTTCTCCCTCCATTACT AAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTAA ] [+] EMBL CD124223 [ GCAAATTATAGGCTGAATATGTTAAAATATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTAAGTACGGATATTGATCTCTTAGTTCAGTACGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCTAAAGACTCCGTTATA AACG AATCCAACTGACAGCTAAATGTAACAT TTTCTCCCTCCATTACT AAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTAAATTGTAAGTCCCAGAGTGCTCTCGGCGGATGAAATCAGGAAACTTTAATAGATAATCATTATGTCCTGGAAAATTAGATGGAATTCTTTTGCCGTCTTTGGTCCATTTGACAATCGTGTGCTCCGGATTAGATCGATATTTAGTCATTAACTTGAGACCAGTTTGTAGTCCAATTCGAACAGTAATCCTTTGTGTGAGGGGTGATAACGCAGTAATTCCACTACCAATGAATGGTATATTGGAGTCATAAGTCAACAATNTAGGCCGCTCATTTGAACCACCAAAATAGGTA ] [-] EMBL CD124239 [ cAATAATAGCCTGAATATGTAAAATTATGACCATTTCTTTGCAATGGTTGTATCAAAGCATCTTTTGAGTACGGATATTGATCTCTTAGTTCAGTACGAAAATTAGTAGGATTCGGTTGATAAGGTAGGCCATTGATTTCT AAGACT CGTTTTATAACGNAATCCACNTGACAGCTAAATGT ACATNNTTCTNCCTCCA TACTAAAAAGTAAAGGTGGAGGAGCACGTATAACTTCAGGTGGACCAACCACACTCACTAAGAACTGAAAATTAACTTGATCATATCCATTTTCCACAAGTAAATTGTAAGTCNCAGAGTGCTCTCGGCGGATGAAATCAGGAAACTTTAATAGATAATCATTATGTCCTGGAAAATTAGATGGAATTCTTTTGCCGTCTTTGGTCCATTTGACAATCGTGTGCTCCGGATTAGATCGATATTTAGTCATTAACTTGAGACCAGTTTGTGGTCCAATTCGAACAGTAATCCTTTGTGTGAGGGGTGATAACACAGTAATTCCACTACCAATGAATGGTATATTGGAGTCATAAGTCAACAATTTAGGCCGCTCATTTGAACCACCAAAATAGGTAG ] [-] EMBL CD132987 [ GGAATTCTTTTGCCGTCTTTGGTCCATTTGACAATCGTGTGCTCTGGATTAGATCGATATTTAGTCATTAACTTGAGACCAGTTTGTGGTCCAATTCGAACAGTAATCCTTTGTGTGAGGGGTGATAACACAGTAATTCCACTACCAATGAATGGTATATTGGAGTCATAAGTCAACAATTTAGGGCGCTCATTTGAACCACCAAAATAGGTAGAATAAACAGCTGAGGAATCCAAGTGGCTCCAGCACACCAAACCCATGTCTTTCCAAGCTGACGCTGTGCGCTTGTATAATACCAAAGTACCATTCGGAGAGACATAACTTTCGAAATAATTTGTAACATGAATGGATGTTTGACGGACTCTACGCATGCAGCCAGCAGATTGTATACCACCAGGAGAC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||