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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7961 cluster # 7961       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7961#0 length = 1014 sequences # 6  

consensusID : consensus_7961#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1014
fasta sequence
                              [TTCACTACCAATGTTTCTACCGATAGTACAAATGAACATAAAAATTCATTAAAGAAATCTAGTCATCATCCTTCGTCGTCGTCACCATCATCACAAATCGGTGTAACTTTTTATTAATAACGATAATAATAGTAGTAAACACTCTCATGGTGAAATACAAGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATCTTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA-CTTCATGTAT-TTTCTTTTCAACTATTGA-AAATTGTAAGTGTTTCCCACCCCCACCACCACCGTCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAATACCACCACTGAGTGTAATATTGCTGAAACAGCACCGCCATTACCGCCAAGAAGAAATGCTTCCAATAATACCAGTACTATTACTACTAATACAACATTATGCAATACATTTATCGGATCACATTAACGGGTCACCTGATGCATGACAATATACTGTATAGTTTCAATATTACTGCTCACTTTTTATGCTGCAAATTCATTCCTTCTCGAATATACACTCTAGTTATAATCTATTCTTTACTGTTACTGATAGCACCATTA]

[-] EMBL CD157438             [TTCACTACCAATGTTTCTACCGATAGTACAAATGAACATAAAAATTCATTAAAGAAATCTAGTCATCATCCTTCGTCGTCGTCACCATCATCACAAATCGGTGTAACTTTTTATTAATAACGATAATAATAGTAGTAAACACTCTCATGGTGAAATACAAGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATCTTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI977669             [                                                                                                                                                               AGAACGTAAATATTTACGTATTCCAAATGCATTTTCTGTATATTCACATATATCCAATACAACTGTATCAGGCGCCAAACATCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTACACCATTACCGTCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCCCACCACCACCGACACCTTCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCC                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI975373             [                                                                                                                                                                                                                                                                              TTCTCCGATAATTTCTCCTAGTCATCAAGCAACAAATTCGATGATTAGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCCATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGACA   TCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCNCACCACCACCGTCACCTCCTTTACCTTCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATACTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTCACATTAAGTTCAGATACGACTACTATTAATACCACCACTGAGTGTAATATTGCTGAAACAGCACCGCCA                                                                                                                                                                                                                             ]
[+] EMBL BF936878             [                                                                                                                                                                                                                                                                                                                                                                                                TGTTGGTTGTTCACATCAACCACCACCTCCACCATTACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTCCACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATA CTTCATGTAT TTTCTTTTCAACTATTGA AAATTGTAAGTGTTTCCCACCCCCACCACCACCGCCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAATACCACCACTGAGTGTAGTATTGCTGAAACAGCACCGCCATTACCGCCAAGAAGAAATGCTTCCAATAATACCAGTACTATTACTACTAATACAACATTATGCAATACATTTATCGGATCACATTAACGGGTCACCTGATGCATGACAATATACTGTATAGTTTCAATATTACTGCTCACTTTTTATGCTGCAAATTCATTCCTTCTCGAATATACACTCTAGTTATAATCTATTCTTTACTGTTACTGATAGCACCATTA]
[+] EMBL AI977383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCATCAAATANCTTCATGTATATTTCTTTTCAACTATTGACAAATTGTAAGTGTTTCCCACCCCCACCACCACCGTCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTAAT                                                                                                                                                                                                                                                                    ]
[-] EMBL CD160885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAACTACTCTGTTCGTTCGACTGCAGCAACAAATCCTGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATCAGTTACATTAAGTCCAGATACGACTACTATTA                                                                                                                                                                                                                                                                      ]


>consensus_7961#0 TTCACTACCAATGTTTCTACCGATAGTACAAATGAACATAAAAATTCATTAAAGAAATCT AGTCATCATCCTTCGTCGTCGTCACCATCATCACAAATCGGTGTAACTTTTTATTAATAA CGATAATAATAGTAGTAAACACTCTCATGGTGAAATACAAGAACGTAAATATTTACGTAT TCCAAATGCATTTTCTGTATCTTCACATATATCCAATACAACTGTATCAGGCGCCAAACA TCAACACAGTATGTCTGACAGTCATGTCATTTCTCCGATAATTTCTCCTAGTCATCAAGC AACAAATTCGATGATTGGTGTAACAACCGCTTACTCTGCTACTGCTGGGTTGTCGCCGCC ATCAACCCCTTATCCTTCTTCATGTGTTGGTTGTTCACATCAACCACCACCTCCACCATT ACCGCCTAGACAAGGTCGTCAAATTTGTAATTGTTGGAAACATTCTAAAACCCCGAATTC CACTGGATCAACTCTCCACAGAATACCTACTCCGCCATCTTCTCTTCATTCATCAAATAC TTCATGTATTTTCTTTTCAACTATTGAAAATTGTAAGTGTTTCCCACCCCCACCACCACC GTCACCTCCTTTACCTCCGAAGTTAAACTACTCTGTTCGTTCGACTGCAGCAACAAATCC TGTCACCTACAGTCGATCTCCCGATGAGTCTTCTCCTAAGCATTCGAATTTTTTTCAATC AGTTACATTAAGTCCAGATACGACTACTATTAATACCACCACTGAGTGTAATATTGCTGA AACAGCACCGCCATTACCGCCAAGAAGAAATGCTTCCAATAATACCAGTACTATTACTAC TAATACAACATTATGCAATACATTTATCGGATCACATTAACGGGTCACCTGATGCATGAC AATATACTGTATAGTTTCAATATTACTGCTCACTTTTTATGCTGCAAATTCATTCCTTCT CGAATATACACTCTAGTTATAATCTATTCTTTACTGTTACTGATAGCACCATTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)