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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7976 cluster # 7976       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7976#0 length = 1092 sequences # 6  

consensusID : consensus_7976#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1092
fasta sequence
                              [TGAAGATATGAGACGAAGAGANAGGTCCAGCNAGAGCACATGATATCGTGCTACCGGGGTNTACTATTTTGGGCGAAGAAATNGGAGTTNTGCTGAACCTAGATATAAGGTCGATGGGNTCACATTCANAGTCGTCTATGAGTAGATNTACTCCGGGTATATAAATACCAGAGCTATCAACAGNTTCCTGAATAAGACAACTGTCCCTGTTAACATCACGGGATCGTTGTGCAGCGGAACCNATAAAAATGNTATTCCGTTTTGAAATTGAAACTACAGAGTTGCCATAAGAAGACTNTGGGGAAACAGCTGAAGAAGGAGCGCGAGATTTACT-GANA-GGCGAAAAAAACGGGATAAGATTCTCGTCCNTTCCTAACNTTTTAGCTTGGTCTATTTCGGCCATCGACAATGAATGAGCTTCATAATAGACAGGAGATTTACGTTCAGACCGGTATTTATTCTCTTTTAGTTTTAGTGCACCATCTGGAAATTCGTTTATTACACCGAGTGCATAGGTTAAATTGTGAGCCAAGGGTAAAGAGTGACTTTCTGATCTTCGTGCTGCTATTCTGATTTCCGACGATAAGTCGAAACCACGAGAACCTAGACTGTCACAGTGATTATTTGATGTCGAGGGCTCATGAGATTGCTCTTCACATTCATCTTGCCCAACAGGACAGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTGATTCAGAAGGACGTTTAACTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGCTTCCAACTTGTGGCATGTTTGAAAATATAAAACACTTCGAGAGATCTTCACTTACAGACTCTCCATGACTTTTGAAGTCAATATTTTTAGTTGAACAAGCATCACCGCAATTGTTATTCAGGTCGCGGGAAATTTGGGGACACAACGG-AGG-TGAGTAG-ATAATTGTGACTGACCACTTGGTATGACTTGAGATCGAGAAAACTGCCGAGGTGTACTGTCAACGTTCACATATTCTGTCACACAACTAGCAATACCTTCATCATCTACAGTGGCTCTTCTGTCTCTATCATGTCTGCTCGACATTCGTTCGCA]

[-] EMBL AI223462             [TGAAGATATGAGACGAAGAGANAGGTCCAGCNAGAGCACATGATATCGTGCTACCGGGGTNTACTATTTTGGGCGAAGAAATNGGAGTTNTGCTGAACCTAGATATAAGGTCGATGGGNTCACATTCANAGTCGTCTATGAGTAGATNTACTCCGGGTATATAAATACCAGAGCTATCAACAGNTTCCTGAATAAGACAACTGTCCCTGTTAACATCACGGGATCGTTGTGCAGCGGAACCNATAAAAATGNTATTCCGTTTTGAAATTGAAACTACAGAGTTGCCATAAGAAGACTNTGGGGAAACAGCTGAAGAAGGAGCGCGAGATTTACT GANA GGCGAAAAAAACGGGATAAGATTCTCGTCCNTTCCTAACNTTTTAGCTTGGTCTATTTCGGCCATCGACAATGAATGAGCTTCATAATAGACAGGAGATTTACGTTCAGACCGGTATTTATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD149626             [                                                                                                                                                                                                                                                                                                                                     AGATTTACTGGAGAGGGCGAAAAAAACGGGATAAGATTCTCGTCCTTTCCTAACTTTTTAGCTTGTTCTATTTCGGCCATCGACAATGAATGAGCTTCATAATAGACAGGAGATTTACGTTCAGACCGGTATTTATTCTCTTTTAGTTTTAGTGCACCATCTGGAAATTCGTTTATTACACCGAGTGCATAGGTTAAATTGTGAGCCAAGGGTAAAGAGTGACTTTCTGATCTTCGTGCTGCTATTCTGATTTCCGACGATAAGTCGAAACCACGAGAACCTAGACTGTCACAGTGATTATTTGATGTCGAGGGCTCATGAGATTGCTCTTCACATTCATCTTGCCCAACAGGACAGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTGATTCAGAAGGACGTTTAACTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGCTTCCAACTTGTGGCATGTTTGAAAATATAAAACACTTCGAGAGATCTTCACTTACAGACTCTCCATGACTTTTGAAGTCAATATTTTTAGTTGAACAAGCATCACCGCAATTGTTATTCAGGTCGCGGGAAATTTGGGGACACAACGGNAGG TGAGTAGNAT ATTGTGACTGACCACTTGGTATGACTTGAGATCGAG AAACTGCCGAGGT                                                                                                     ]
[-] EMBL CD184816             [                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAGGAGATTAACGTTCAGACCGGTATNTATTCTCTTTTAGTTTTAGTGCACCATCTGGAAATTCGTTTATTACACCGAGTGCATAGGTTAAATTGTGAGCCAAGGGTAAAGAGTGACTTTCTGATCTTCGTGCTGCTATTCTGATTTCCGACGATAAGTCGAAACCACGAGAACCTAGACTGTCACAGTGATTATTNGATGTCGAGGGCTCATGAGATTGCTCTTCACATTCATCTTGCCCAACAGGACAGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTGATTCAGAAGGACGTTTAACTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGCTTCCAACTTGTGGCATGTTTGAAAATAT                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD186135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGATCTTCGTGCTGCTATTCTGATTTCCGACGATAAGTCGAAACCACGAGAACCTAGACTGTCACAGTGATTATTTGATGTCGAGGGCTCATGAGATTGCTCTTCACATTCATCTTGCCCAACAGGACAGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTGATTCAGAAGGACGTTTAACTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGCTTCCAACTTGTGGCATGTTTGAAAATATAAAACGCTTCGAGAGATCTTCACTTACAGACTCTCCATGACTTTTGAAGTCAATATTTTTAGTTGAACAAGCATCACCGCAATTGTTATTCAGGTCGCGGGAAATTTGGGGACACAACGG AGGTTGAGTAG ATAATTGTGACTGACCACTTGGTATGACTTGAGATCGAGAAAACTGCCGAGGTGTACTGTCAACGTTCACATATTCTGTCACACAACTAGCAATACCTTCATCATCTACAGTGGCTCTTCTGTCTCTATCATGTCTGCTCGACATTCGTTCGCA]
[-] EMBL CD078225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTGATTCAGAAGGACGTTTANCTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGCTTCCAACTTGTGGCATGTTTGAAAATATAAAACACTTCGAGAGATCTTCACTTACAGACTCTCCATGACTTTTGAAGTCAATATTTTTAGTTGAACAAGCATCACCGCAATTGTTATTCAGGTCGCGGGAAATTTGGGGACACAACGG AGG Tt                                                                                                                                                                ]
[-] EMBL CD166972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGGACACAACGG AGGTTGAGTAG ATAATTGTGACTGACCACTTGGTATGACTTGAGATCGAGAAAACTGCCGAGGTGTACTGTCAACGTTCA                                                                                     ]


>consensus_7976#0 TGAAGATATGAGACGAAGAGANAGGTCCAGCNAGAGCACATGATATCGTGCTACCGGGGT NTACTATTTTGGGCGAAGAAATNGGAGTTNTGCTGAACCTAGATATAAGGTCGATGGGNT CACATTCANAGTCGTCTATGAGTAGATNTACTCCGGGTATATAAATACCAGAGCTATCAA CAGNTTCCTGAATAAGACAACTGTCCCTGTTAACATCACGGGATCGTTGTGCAGCGGAAC CNATAAAAATGNTATTCCGTTTTGAAATTGAAACTACAGAGTTGCCATAAGAAGACTNTG GGGAAACAGCTGAAGAAGGAGCGCGAGATTTACTGANAGGCGAAAAAAACGGGATAAGAT TCTCGTCCNTTCCTAACNTTTTAGCTTGGTCTATTTCGGCCATCGACAATGAATGAGCTT CATAATAGACAGGAGATTTACGTTCAGACCGGTATTTATTCTCTTTTAGTTTTAGTGCAC CATCTGGAAATTCGTTTATTACACCGAGTGCATAGGTTAAATTGTGAGCCAAGGGTAAAG AGTGACTTTCTGATCTTCGTGCTGCTATTCTGATTTCCGACGATAAGTCGAAACCACGAG AACCTAGACTGTCACAGTGATTATTTGATGTCGAGGGCTCATGAGATTGCTCTTCACATT CATCTTGCCCAACAGGACAGCAATTTCGCTTCGCAGAAGAGTTTGAAATCAAACAGATTG ATTCAGAAGGACGTTTAACTGAATGTGAAGTCCTATAATTTTCTCCAAATATTTGTTTGC TTCCAACTTGTGGCATGTTTGAAAATATAAAACACTTCGAGAGATCTTCACTTACAGACT CTCCATGACTTTTGAAGTCAATATTTTTAGTTGAACAAGCATCACCGCAATTGTTATTCA GGTCGCGGGAAATTTGGGGACACAACGGAGGTGAGTAGATAATTGTGACTGACCACTTGG TATGACTTGAGATCGAGAAAACTGCCGAGGTGTACTGTCAACGTTCACATATTCTGTCAC ACAACTAGCAATACCTTCATCATCTACAGTGGCTCTTCTGTCTCTATCATGTCTGCTCGA CATTCGTTCGCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)