These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 562 fasta sequence [TGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTCCCGACAACACAAATCCCCCTGATCTCAACGACAGAATCAATGAAATGGACAGCACACTGAACCCCGAGTCGACAATAGTTCCGAGTCACATATCTCCACTGTTGGGACCCACCTCGGAAACCAGTATCGCCACAATACGCAGTGACACGATGACTGAAAGTCGTCTTGACGAGAATCACGAACTGTCTGAGACTAGTCATCAGGACTTGCAAAATCAAAGCAAAACTCCCACTGAACTCG-TAGAAGAAATT-C-ATGAAGTGGAGAGTGAAC-AA-ATATTCGACACTCCTTTGGCCGCTTGCATG-A-GTACGTCGAAGGCACACTTAGATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTCCCGACAACACAAATCCCAATGATATCAACGACTCAATCAATGAAATGGACAGCACACTGAACCCCGAGTCGCGAATAGTTCC] [+] EMBL CD117133 [TGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTCCCGACAACACAAATCCCCCTGATCTCAACGACAGAATCAATGAAATGGACAGCACACTGAACCCCGAGTCGACAATAGTTCCGAGTCACATATCTCCACTGTTGGGACCCACCTCGGAAACCAGTATCGCCACAATACGCAGTGACACGATGACTGAAAGTCGTCTTGACGAGAATCACGAACTGTCTGAGAC ] [+] EMBL CD153325 [ GGGACCCACCTCGGAAACCAGTATCGCCACAATACGCAGTGACACGATGACTGAAAGTCGTCTTGACGAGAATCACGAACTGTCTGAGACTAGTCATCAGGACTTGCAAAATCAAAGCAAAACTCCCACTGAACTCG TAGAAGAAATT C ATGAAGTGGAGAGTGAAC AA ATATTCGACACTCCTTTGGCCGCTTGCATG A GTACGTCGAAGGCACACTTAGATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACA ] [-] EMBL CD139334 [ GTCGTCTGGACGAGAATCACGTACTGTTTGAGGCTAGTCATCAGGACTTGCAAAATCAAAGCAAAACTCCCACTGAACTCG TAGAAGAAATT C ATGAAGTGGAGAGTGAAC AA ATATTCGACACTCCTTTGGCCGCTTGCATG A GTACGTCGAAGGCACACTTAGATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTC ] [+] EMBL CD139251 [ AGCAAAACTCCCACTGAACTCG TAGAAGAAATT C ATGAAGTGGAGAGTGAAC AA ATATTCGACACTCCTTTGGCCGCTTGCATG A GTACGTCGAAGGCACACTTAGATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTCCCGACAACACAAATCCCAATGATATCAACGACTCAAT ] [+] EMBL CD139224 [ gtGCAAAACTCCCACTGAACTCGCTACAAGAAATTACTATGAAGTGGAGAGTGAACTAATATATTCGACACTCCTTTGGCCGCTTGCTTGTAGGTACGTCGAAGGC CCCTTATATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTACCGACAACACAAATCCCACTGATCTCAACGACAAAATCAATGAAATGGACAGCACACTGAACCCCGAGTCGCGAATAGTTCC] [-] EMBL CD139228 [ GCAAAACTCCCACTGAACTCG TAGAAGAAATT C ATGAAGTGGAGAGTGAAC AA ATATTCGACACTCCTTTGGCCGCTTGCATG A GTACGTCGAAGGCACACTTAGATCGAGTGATTGATCAACCACCTGTTGTCGAGTTGTCCCAAATATCAGATAATATGACTGACCACATCGACACAGCGCATCTAAACGATCAACTTCACACCTCTC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||