cluster # 8080

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Schistosoma mansoni
cluster # 8080 cluster # 8080 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8080#0 length = 1175 sequences # 2

consensus_8080#1 length = 917 sequences # 3
consensus_8080#2 length = 728 sequences # 1

consensusID : consensus_8080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1175
fasta sequence

                              [CACCGGCATAAACAAGTTTATACACAGACTGAAGCTAATTCATAAGTTACTTGTATTAGTACATTGTGCCGTCAAATAATATTAACTAAAACCCGAAAGGTGATATCAAAGTAAATGGCACGAAATAAACATTCTCACTGTTTTCTGCTTATGACTTGCCTAGTTGATGCGATGTATCAACAAGTATTTAAAACAAAGAGCCTACAAACTATCGATTAATAACTCATAGTACGGTGTGATGAATCAAAGCAGTTTATGGATTAATGGGTCAGTATGTGCTCATTTACCAGGAGATTATCAAATAAATTACACCTGCTTTTGCTGTCCTATCAGGATGAAGATTTTTTAGATAGACATCGCTTCACCTGGTGATAAATTCAGTGCGATATTGTATAGAAAACGTTTACCAGTTCCGTATCAACTACATACTTTCAAAGTATCGTTTTAGAAATTATTGTCTCTCTGTGGTTCCCATCATTTGACTGTTACCAGCCCATTACATAAGCAGATAACCGAAAATTGATATCTTGGCTTTTGTTGTTGTCATTACGCTGTTAAAATGTATGAACCCGTGTCTAGTAATATGCTTACTTAAATTATATTGATAAGAAAGCTTTCCTAAAATGATGTGGTAAACAACCGTTCCAATTGTTTGAATTCTATTTTTTTTTATTAAGTTCTCATGAATTTATCATAATTTCCAGCTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGANAATGAGGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCTTACAGTTTATAGAAAATGCATCGTGTATGCCGCTTCATCCTGTCCAGTCATCAACTGTTTCTGTCGACACTTTTTGAATTGCTTGATAACGTTACTTTCAGATTGCATTTTAAACAACTTTATATCAAATTATCAACGTCTATAGGATATTGCTGTTGATGTCAACTCGCTATCTAGTATCGTCTTTTATGCTACAGATTAATCGTTTAACTTTTTACGTACACTGTTCATGACTATG]

[-] EMBL CD202406             [CACCGGCATAAACAAGTTTATACACAGACTGAAGCTAATTCATAAGTTACTTGTATTAGTACATTGTGCCGTCAAATAATATTAACTAAAACCCGAAAGGTGATATCAAAGTAAATGGCACGAAATAAACATTCTCACTGTTTTCTGCTTATGACTTGCCTAGTTGATGCGATGTATCAACAAGTATTTAAAACAAAGAGCCTACAAACTATCGATTAATAACTCATAGTACGGTGTGATGAATCAAAGCAGTTTATGGATTAATGGGTCAGTATGTGCTCATTTACCAGGAGATTATCAAATAAATTACACCTGCTTTTGCTGTCCTATCAGGATGAAGATTTTTTAGATAGACATCGCTTCACCTGGTGATAAATTCAGTGCGATATTGTATAGAAAACGTTTACCAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD079998             [                                                                                                                                                                                                                                                                        TGGGTCAGTATGTACTCATTTACCAGGAGATTATCAAATAAATTACAACTGCTTTTGCTGTCCTATCAGGATGAAGATTTTCTAGCTAGACATCGCTTCACCTGGTGATAAATTCAGTACGATATTGAATAGAAAACGTTTACCAGTTCCGTATCAACTACATACTTTCAAAGTATCGTTTTAGAAATTATTGTCTCTCTGTGGTTCCCATCATTTGACTGTTACCAGCCCATTACATAAGCAGATAACCGAAAATTGATATCTTGGCTTTTGTTGTTGTCATTACGCTGTTAAAATGTATGAACCCGTGTCTAGTAATATGCTTACTTAAATTATATTGATAAGAAAGCTTTCCTAAAATGATGTGGTAAACAACCGTTCCAATTGTTTGAATTCTATTTTTTTTTATTAAGTTCTCATGAATTTATCATAATTTCCAGCTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGANAATGAGGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCTTACAGTTTATAGAAAATGCATCGTGTATGCCGCTTCATCCTGTCCAGTCATCAACTGTTTCTGTCGACACTTTTTGAATTGCTTGATAACGTTACTTTCAGATTGCATTTTAAACAACTTTATATCAAATTATCAACGTCTATAGGATATTGCTGTTGATGTCAACTCGCTATCTAGTATCGTCTTTTATGCTACAGATTAATCGTTTAACTTTTTACGTACACTGTTCATGACTATG]




>consensus_8080#0
CACCGGCATAAACAAGTTTATACACAGACTGAAGCTAATTCATAAGTTACTTGTATTAGT
ACATTGTGCCGTCAAATAATATTAACTAAAACCCGAAAGGTGATATCAAAGTAAATGGCA
CGAAATAAACATTCTCACTGTTTTCTGCTTATGACTTGCCTAGTTGATGCGATGTATCAA
CAAGTATTTAAAACAAAGAGCCTACAAACTATCGATTAATAACTCATAGTACGGTGTGAT
GAATCAAAGCAGTTTATGGATTAATGGGTCAGTATGTGCTCATTTACCAGGAGATTATCA
AATAAATTACACCTGCTTTTGCTGTCCTATCAGGATGAAGATTTTTTAGATAGACATCGC
TTCACCTGGTGATAAATTCAGTGCGATATTGTATAGAAAACGTTTACCAGTTCCGTATCA
ACTACATACTTTCAAAGTATCGTTTTAGAAATTATTGTCTCTCTGTGGTTCCCATCATTT
GACTGTTACCAGCCCATTACATAAGCAGATAACCGAAAATTGATATCTTGGCTTTTGTTG
TTGTCATTACGCTGTTAAAATGTATGAACCCGTGTCTAGTAATATGCTTACTTAAATTAT
ATTGATAAGAAAGCTTTCCTAAAATGATGTGGTAAACAACCGTTCCAATTGTTTGAATTC
TATTTTTTTTTATTAAGTTCTCATGAATTTATCATAATTTCCAGCTGGAACGACATATAA
TAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGGTGATGGTCTCTTAGAT
GGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTAAT
GAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGANAATGAGGATCAAAATAATAAA
TTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCTTACAGTTTATAGAAAATGCATCG
TGTATGCCGCTTCATCCTGTCCAGTCATCAACTGTTTCTGTCGACACTTTTTGAATTGCT
TGATAACGTTACTTTCAGATTGCATTTTAAACAACTTTATATCAAATTATCAACGTCTAT
AGGATATTGCTGTTGATGTCAACTCGCTATCTAGTATCGTCTTTTATGCTACAGATTAAT
CGTTTAACTTTTTACGTACACTGTTCATGACTATG

consensusID : consensus_8080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 917
fasta sequence

                              [GGGATTGCTGTATGGCGAAGGTCAACATTTGTAATGTTGAGGTTTTGGACAACCCTGCTTCATTTTTTGATCCATTTAAGTTCCGTATAACATTCGAGTGTCATGAACCTCTGGATGATGATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCATACAACCCATCTTTAGACCAGACATTGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTGATCCAAAAATAATTCCTAATGAAGATATTGTTGGCGTAACAGTTGTGCTTATACAAGCTTTGTACAGAGATAAAGAATTTATACGTGTTGGTTATTATGTTAACAATGAGTACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTCTGCTTAACGAACTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGG-GTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGAAAATGAGGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTGCTTGATAAACGTTACTTTCAAGATTGCATTTTAAAACAAACTTTTATATCAGAATTTATCACACGTCTATGATGATATTGCTGTTGTATGTTCAACTCGCTATACTAGGTATCGCTCTTTTTTATGCCTACAAGATTTAATACGTTTTACACTTTTTTAACTGTACAACTGTTCGATGTACCTAATAGCAT]

[+] EMBL CD083086             [GGGATTGCTGTATGGCGAAGGTCAACATTTGTAATGTTGAGGTTTTGGACAACCCTGCTTCATTTTTTGATCCATTTAAGTTCCGTATAACATTCGAGTGTCATGAACCTCTGGATGATGATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCATACAACCCATCTTTAGACCAGACATTGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTGATCCAAAAATAATTCCTAATGAAGATATTGTTGGCGTAACAGTTGTGCTTATACAAGCTTTGTACAGAGATAAAGAATTTATACGTGTTGGTTATTATGTTAACAATGAGTACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTCTGCTTAACGAACTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGNGT ATGAAG                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD074788             [                                                                                                                                                                                                                                                                                                                                                                       TACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTCTGCTTAACGAACTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGG GTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGAAAATGAGGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTGCTTGATAAACGTTACTTTCAAGATTGCATTTTAAAACAAACTTTTATATCAGAATTTATCACACGTCTATGATGATATTGCTGTTGTATGTTCAACTCGCTATACTAGGTATCGCTCTTTTTTATGCCTACAAGATTTAATACGTTTTACACTTTTTTAACTGTACAACTGTTCGATGTACCTAATAGCAT]
[-] EMBL CD076660             [                                                                                                                                                                                                                                                                                                                                                                                                    ACCGGCTGAACCTCTGCTTAACGAACTGGAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGG GTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGAAAATGAGGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTGCTTGATAAACGTTACTTTCAAGATTGCATTTTAAAACAAACTTTTATATCAGAATTTATCACACGTCTATGATGATATTGCTGTTGTATGTTCAACTCGCTATACTAGGTATCGCTCTTTTTTATGCCTACAAGATTTAATACGTTTTACACTTTTTTAACTGTACAACTGTTCGATGTACCTAATAGCAT]




>consensus_8080#1
GGGATTGCTGTATGGCGAAGGTCAACATTTGTAATGTTGAGGTTTTGGACAACCCTGCTT
CATTTTTTGATCCATTTAAGTTCCGTATAACATTCGAGTGTCATGAACCTCTGGATGATG
ATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCATACAACCCATCTTTAGACCAGACAT
TGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGTCGTCATCAATTTTCTTTTGAGGCTA
ATGCTCCTGATCCAAAAATAATTCCTAATGAAGATATTGTTGGCGTAACAGTTGTGCTTA
TACAAGCTTTGTACAGAGATAAAGAATTTATACGTGTTGGTTATTATGTTAACAATGAGT
ACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTCTGCTTAACGAACTGGAAC
GACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTC
TCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTAC
TGGGTAATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGAAAATGAGGATCAAA
ATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAA
ATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTT
GAATTGCTTGATAAACGTTACTTTCAAGATTGCATTTTAAAACAAACTTTTATATCAGAA
TTTATCACACGTCTATGATGATATTGCTGTTGTATGTTCAACTCGCTATACTAGGTATCG
CTCTTTTTTATGCCTACAAGATTTAATACGTTTTACACTTTTTTAACTGTACAACTGTTC
GATGTACCTAATAGCAT

consensusID : consensus_8080#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence

                              [GAGTGTCATGAACCTCTGGATGATGATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCATACAACCCATCTTTAGACCAGACATTGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTNNNNNAAAAATAATTCCTAATGAAGATATTGTTGGCGTAACAGTTGTGCTTATACAAGCTTTGTACAGAGATAAAGAATTTATACGTGTTGGTTATTATGTTAACAATGAGTACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTNNNNNNNNNNNNNNNNAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTAATGAAGAACAAGTGGAGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTGCTTGATAAACGTTACTTTCAAGATTGCATTNTANAACAAACTTTGTATGTTCACTCGCATACTAGTATCGCTCTTTTTATGCTACAGATTTATACGTTTACACTTTTACTGACACTGTCGATGACTAT]

[+] EMBL CD080955             [GAGTGTCATGAACCTCTGGATGATGATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCATACAACCCATCTTTAGACCAGACATTGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTNNNNNAAAAATAATTCCTAATGAAGATATTGTTGGCGTAACAGTTGTGCTTATACAAGCTTTGTACAGAGATAAAGAATTTATACGTGTTGGTTATTATGTTAACAATGAGTACAAAACAGAAGAATTACGCCTTGAACCACCGGCTGAACCTNNNNNNNNNNNNNNNNAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTAATGAAGAACAAGTGGAGATCAAAATAATAAATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCATCGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTGCTTGATAAACGTTACTTTCAAGATTGCATTNTANAACAAACTTTGTATGTTCACTCGCATACTAGTATCGCTCTTTTTATGCTACAGATTTATACGTTTACACTTTTACTGACACTGTCGATGACTAT]




>consensus_8080#2
GAGTGTCATGAACCTCTGGATGATGATCTAGAATGGAAGTTAGTGTACGTTAGCAGCGCA
TACAACCCATCTTTAGACCAGACATTGGATTCCATCTTAGTTGGTCCAATTCCAGTTGGT
CGTCATCAATTTTCTTTTGAGGCTAATGCTCCTNNNNNAAAAATAATTCCTAATGAAGAT
ATTGTTGGCGTAACAGTTGTGCTTATACAAGCTTTGTACAGAGATAAAGAATTTATACGT
GTTGGTTATTATGTTAACAATGAGTACAAAACAGAAGAATTACGCCTTGAACCACCGGCT
GAACCTNNNNNNNNNNNNNNNNAACGACATATAATAGCTTCAGACCCTCGTGTTACTCGC
TTTCCAATTGACTGGGGTGATGGTCTCTTAGATGGGTGTCCAGAACCAGAACAGCCTACA
GAAGATAACGAAGAGTCTAATTTACTGGGTAATGAAGAACAAGTGGAGATCAAAATAATA
AATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCAT
CGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTG
CTTGATAAACGTTACTTTCAAGATTGCATTNTANAACAAACTTTGTATGTTCACTCGCAT
ACTAGTATCGCTCTTTTTATGCTACAGATTTATACGTTTACACTTTTACTGACACTGTCG
ATGACTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8080#1      ------------------------------------------------------------
consensus_8080#2      ------------------------------------------------------------
consensus_8080#0      CACCGGCATAAACAAGTTTATACACAGACTGAAGCTAATTCATAAGTTACTTGTATTAGT 60
                                                                                  

consensus_8080#1      ------------------------------------------------------------
consensus_8080#2      ------------------------------------------------------------
consensus_8080#0      ACATTGTGCCGTCAAATAATATTAACTAAAACCCGAAAGGTGATATCAAAGTAAATGGCA 120
                                                                                  

consensus_8080#1      ------------------------------------------------------------
consensus_8080#2      ------------------------------------------------------------
consensus_8080#0      CGAAATAAACATTCTCACTGTTTTCTGCTTATGACTTGCCTAGTTGATGCGATGTATCAA 180
                                                                                  

consensus_8080#1      ------------------------------------------------------------
consensus_8080#2      ------------------------------------------------------------
consensus_8080#0      CAAGTATTTAAAACAAAGAGCCTACAAACTATCGATTAATAACTCATAGTACGGTGTGAT 240
                                                                                  

consensus_8080#1      ------------GGGATTGCTGTATGGCGAAGGTCAACATTTGTAATGTTGAGGTTTTGG 48
consensus_8080#2      ------------------------------------------------------------
consensus_8080#0      GAATCAAAGCAGTTTATGGATTAATGGGTCAGTATGTGCTCATTTACCAGGAGATTATCA 300
                                                                                  

consensus_8080#1      ACAACCCTGCTTCATTTTTTGATCCATTTAAGTTCCGTATAACATTCGAGT-GTCAT-GA 106
consensus_8080#2      -----------------------------------------------GAGT-GTCAT-GA 11
consensus_8080#0      AATAAATTACACCTGCTTTTGCTGTCCTATCAGGATGAAGATTTTTTAGATAGACATCGC 360
                                                                        * * *** * 

consensus_8080#1      ACCTCTGGATGATGA-TCTAGAATGGAAGT---TAGTGTACGTT----AGCAGCGCAT-- 156
consensus_8080#2      ACCTCTGGATGATGA-TCTAGAATGGAAGT---TAGTGTACGTT----AGCAGCGCAT-- 61
consensus_8080#0      TTCACCTGGTGATAAATTCAGTGCGATATTGTATAGAAAACGTTTACCAGTTCCGTATCA 420
                        * *  * **** * *  **   *  * *   ***   *****    **   ** **  

consensus_8080#1      ACAACCCATCTTTAGACCAG-ACATTGGA-----TTCCATCTTAGTTGGTCCAATTCCAG 210
consensus_8080#2      ACAACCCATCTTTAGACCAG-ACATTGGA-----TTCCATCTTAGTTGGTCCAATTCCAG 115
consensus_8080#0      ACTACATACTTTCAAAGTATCGTTTTAGAAATTATTGTCTCTCTGTGGTTCCCAT--CAT 478
                      ** **  *  ** * *  *     ** **     **   ***  ** * *** **  ** 

consensus_8080#1      TTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTGATCCAAAAA--TAATTCCTAA 268
consensus_8080#2      TTGGTCGTCATCAATTTTCTTTTGAGGCTAATGCTCCTNNNNNAAAAA--TAATTCCTAA 173
consensus_8080#0      TTGACTGTTACCAGCCCATTACATAAGCAGATAACCGAAAATTGATATCTTGGCTTTTGT 538
                      ***   ** * **      *    * **  **   *        * *   *   *  *  

consensus_8080#1      TGAAGATATT--GTTGGCGTAACAGTTGTGCTTATA-CAAGCTTTGTACAGAGATAAAGA 325
consensus_8080#2      TGAAGATATT--GTTGGCGTAACAGTTGTGCTTATA-CAAGCTTTGTACAGAGATAAAGA 230
consensus_8080#0      TGTTGTCATTACGCTGTTAAAATGTATGAACCCGTGTCTAGTAATATGCTTACTTAAATT 598
                      **  *  ***  * **    **    **  *   *  * **   * * *  *  ****  

consensus_8080#1      ATTTATACGTGTTGGTT--------ATTATGTTAACAATGA--GTACAAAACAGAAGAAT 375
consensus_8080#2      ATTTATACGTGTTGGTT--------ATTATGTTAACAATGA--GTACAAAACAGAAGAAT 280
consensus_8080#0      ATATTGATAAGAAAGCTTTCCTAAAATGATGTGGTAAACAACCGTTCCAATTGTTTGAAT 658
                      ** *  *   *   * *        ** ****    **  *  ** * **      ****

consensus_8080#1      TACGCCTTGAACCACCGGCT------GAACCTCTGCTTAA--CGAACTGGAACGACATAT 427
consensus_8080#2      TACGCCTTGAACCACCGGCT------GAACCTNNNNNNNN--NNNNNNNNAACGACATAT 332
consensus_8080#0      TCTATTTTTTTTTATTAAGTTCTCATGAATTTATCATAATTTCCAGCTGGAACGACATAT 718
                      *     **     *     *      ***  *                  **********

consensus_8080#1      AATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGG-TGATGGTCTCTTAG 486
consensus_8080#2      AATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGG-TGATGGTCTCTTAG 391
consensus_8080#0      AATAGCTTCAGACCCTCGTGTTACTCGCTTTCCAATTGACTGGGGGTGATGGTCTCTTAG 778
                      ********************************************* **************

consensus_8080#1      ATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTA 546
consensus_8080#2      ATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTA 451
consensus_8080#0      ATGGGTGTCCAGAACCAGAACAGCCTACAGAAGATAACGAAGAGTCTAATTTACTGGGTA 838
                      ************************************************************

consensus_8080#1      ATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGAAAATGAGGATCAAAATAATA 606
consensus_8080#2      ATGAAGAACAAGTGGA-------------------------------GATCAAAATAATA 480
consensus_8080#0      ATGAAGAACAAGTGGAAAATATTTCTCAACTGGATCAGGANAATGAGGATCAAAATAATA 898
                      ****************                               *************

consensus_8080#1      AATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCAT 666
consensus_8080#2      AATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCGTACAGTTTATAGAAAATGCAT 540
consensus_8080#0      AATTAGACCCATCTAACTTTTGTGAAGGCCAGTCTGGCTTACAGTTTATAGAAAATGCAT 958
                      ************************************** *********************

consensus_8080#1      CGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTG 726
consensus_8080#2      CGTGTATGCCGCTCCATCCTGTCCAGTCATCAACTGTTCCTGTCGACACTTTTTGAATTG 600
consensus_8080#0      CGTGTATGCCGCTTCATCCTGTCCAGTCATCAACTGTTTCTGTCGACACTTTTTGAATTG 1018
                      ************* ************************ *********************

consensus_8080#1      CTTGATAAACGTTACTTTCAAGATTGCATTTTAAAACAAACTTTTATATCAGAATTTATC 786
consensus_8080#2      CTTGATAAACGTTACTTTCAAGATTGCATTNTANAACAAACTTT-GTATGTTCACTCG-C 658
consensus_8080#0      CTTGATAA-CGTTACTTTCA-GATTGCATTTTAAA--CAACTTT---ATATCAAATTATC 1071
                      ******** *********** ********* ** *   ******   **    * *   *

consensus_8080#1      ACACGTCTATGATGATATTGCTGTTGTATGTTCAACTCGCTATACTAGGTATCGCTCTTT 846
consensus_8080#2      ATACTAGTATCGCTCTTTTTATGCTACAGATTTATACGTTTACACTTT-TACTGACACTG 717
consensus_8080#0      A-ACGTCTATAG-GATATTGCTGTTG-ATGT-CAACTCGCTAT-CTAG-TATCGTCTTTT 1125
                      * **   ***     * **  ** *  *  *  *      **  **   **  *    * 

consensus_8080#1      TTTATGCCTACAAGATTTAATACGTTTTACACTTTTTTAACTGTACAACTGTTCGATGTA 906
consensus_8080#2      TCGATGACTAT------------------------------------------------- 728
consensus_8080#0      ATGCTACAGATTAATCGTTTAACTTTTTACGTACACTGTTCATGACTATG---------- 1175
                          *    *                                                  

consensus_8080#1      CCTAATAGCAT 917
consensus_8080#2      -----------
consensus_8080#0      -----------