Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8093 cluster # 8093       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8093#0 length = 844 sequences # 6  

consensusID : consensus_8093#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 844
fasta sequence
                              [CAGCCACCCTACGCCTCATAGCTGCACGATACGTCTGGCCGTCAATGAATAAAGATGTCCGTATGTGGGTAAAACAATGTTTACAATGTCAACGATCAAAAGTGCACAGGCACGTAGCTGCCCCTATTGGCACTTTCGCTACGCCTGATGCTCGCTTCGATCACGTCCACATAGACATTGTAGGACCATTACCACCATCGCACGGGTATGATCACATACTCACATGCATTGATCGTTTCACAAGATGGCCCGAAGCTATTCCCATCACGTCTATTACGGCGGAGACAGTTGCTCACCGCTTCGTAGAACGATGGATAGCTATGTACGGTTGTCCCTCGACTGTCACGACTGACTGAGGACAACAATTTGAGTCCGCATTATTCTCCTCACTAACACGGCTGCTTGGTACGGAACGCATACGCACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTAAAAGTGCTCTTCGAGCANACGAAAACAACAATTGGTACGAAACCCTTCCGCTCGTCCTCCTGGGAATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACGGCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGAGCAGCACTAAGTTCGGCGAATCAGACTACGTCCAACGACTGTCTGCATTCATGCGAACACTGACTCCGGTGTCAACTCGTATACAACATCGACAGGTCGCTCTCCCTCGAGAGTTATCTACCTGTTCACATGTTTTCATACGAGTAGATTCGGTACGGAAACCTCTACAACAGCCTTACGGAGGACCTTTTCACGNGATTTC]

[+] EMBL BF936186             [CAGCCACCCTACGCCTCATAGCTGCACGATACGTCTGGCCGTCAATGAATAAAGATGTCCGTATGTGGGTAAAACAATGTTTACAATGTCAACGATCAAAAGTGCACAGGCACGTAGCTGCCCCTATTGGCACTTTCGCTACGCCTGATGCTCGCTTCGATCACGTCCACATAGACATTGTAGGACCATTACCACCATCGCACGGGTATGATCACATACTCACATGCATTGATCGTTTCACAAGATGGCCCGAAGCTATTCCCATCACGTCTATTACGGCGGAGACAGTTGCTCACCGCTTCGTAGAACGATGGATAGCTATGTACGGTTGTCCCTCGACTGTCACGACTGACTGAGGACAACAATTTGAGTCCGCATTATTCTCCTCACTAACACGGCTGCTTGGTACGGAACGCATACGCACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTAAAAGTGCTCTTCGAGCACACGAAAACAAC                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL SM625                [                                                                                                                                                      agCGCTTCGATCACGTTCACATAGACATTGTAGGACCATTACCACCATCGCACGGGTATGATCACATACTCACATGCATTGATCGTTTCACAAGATGGCCCGAAGCTATTCCCATCACGTCTATTACGGCGGAGACAGTTGCTCACCGCTTCGTAGAACGATGGATAGCTATGTACGGTTGTCCCTCGACTGTCACGACTGACCGAGGACAACAATTTGAGTCCGCATTATTCTCCTCACTAACACGGCTGCTTGGTACGGAACGNATACGCACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTAAAAGTGCTCTTCGNGC NACGGAAACAACAATTGGTACGNAACCCTTCCG                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL SMT14352             [                                                                                                                                                                                                                                                                                                                                                                                                      TAACACGGCTGCTTGGTACGGAA GCATACGCACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTAAAAGTGCTCTTCGAGCAANCGAAAACAACAATTGGTACGAAACCCTTCCGCTCGTCCTCCTGGGAATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACGGCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGAGCAGCACTAAGTTCGGCGAA                                                                                                                                                                                      ]
[+] EMBL AI018945             [                                                                                                                                                                                                                                                                                                                                                                                                                     GTACGGAACGCATACG ACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTAAAAGTGCTCTTCGAGCA ACGAAAACAACAATTGGTACGAAACCCTTCCGCTCGTCCTCCTGGGAATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACGGCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGGGCAGCACTANGTTCGGCGAATCAGACTACGTCCAACGNCTGTCTGCATTCATACGAACACTGACTCCGGTGTCAc                                                                                                                               ]
[+] EMBL AI018930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCCTGGGAATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACGGCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGAGCAGCACTAAGTTCGGCGAATCAGACTACGTCCAACGACTGTCTGCATTCATGCGAACACTGACTCCGGTGTCAACTCGTATACAACATCGACAGGTCGCTCTCCCTCGAGAGTTATCTACCTGTTCACATGTTTTCATACGAGTAGATTCGGTACGGAAACCTCTACAACAGCCTTACGGAGGACCTTTTCACGNGATTTC]
[+] EMBL SMT14444             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACGGCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGAGCAGCACTAAGTTCGGCGAATCAGACTACGTCCAACGACTGTNTGCATTCATGCGAACACTGACTCCGGTGTCAACTCGTATACAACATCGACAGGTCGCTCTCCCTCGAGAGTTATCTACCTGTTCACATGTTTTCATACGAGTAGATTCGGTACGc                                            ]


>consensus_8093#0 CAGCCACCCTACGCCTCATAGCTGCACGATACGTCTGGCCGTCAATGAATAAAGATGTCC GTATGTGGGTAAAACAATGTTTACAATGTCAACGATCAAAAGTGCACAGGCACGTAGCTG CCCCTATTGGCACTTTCGCTACGCCTGATGCTCGCTTCGATCACGTCCACATAGACATTG TAGGACCATTACCACCATCGCACGGGTATGATCACATACTCACATGCATTGATCGTTTCA CAAGATGGCCCGAAGCTATTCCCATCACGTCTATTACGGCGGAGACAGTTGCTCACCGCT TCGTAGAACGATGGATAGCTATGTACGGTTGTCCCTCGACTGTCACGACTGACTGAGGAC AACAATTTGAGTCCGCATTATTCTCCTCACTAACACGGCTGCTTGGTACGGAACGCATAC GCACTACCGCCTACCATCCAGCATCAAACGGTTTAGTTGAACGGTTTCATCGCCAACTTA AAAGTGCTCTTCGAGCANACGAAAACAACAATTGGTACGAAACCCTTCCGCTCGTCCTCC TGGGAATCAGAACGAGTCTAAAGGCAGATATTCAATGTTCCGCCGCTGAACTTGTTTACG GCACGACATTGCGTCTGCCTGGGGAATTTTTCACACCACGGAGCAGCACTAAGTTCGGCG AATCAGACTACGTCCAACGACTGTCTGCATTCATGCGAACACTGACTCCGGTGTCAACTC GTATACAACATCGACAGGTCGCTCTCCCTCGAGAGTTATCTACCTGTTCACATGTTTTCA TACGAGTAGATTCGGTACGGAAACCTCTACAACAGCCTTACGGAGGACCTTTTCACGNGA TTTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)