These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8097#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 791 fasta sequence [ATAGGTAGGTTGAGTGAGTGAGTGAGTGAGTGATTAACTAATTAATTCCAAGATGCAGGATCAGATCATCAGAAACATAATCATATTCATAATGCAGCATGATTATTGATGTGCAGCGAGTTCAGATGATCCGTCATTGTTGGC-AGTCCTCAGAATTGCACAATTGCAACAAGATAACTTATTCATTTCGACTTCAGTATATATTCAAATTTGAATAGCTTCTCTTGAATTTTGTGTTAGTTTCTCACCGACACATTGTCATTTTCCAACTGTACTGAGATCTATTATTAATAATGATGAATAATGGCGTTGCATTTCACTTACTTATATGATGATAAGTATGTAAGAGAAGGAATTGTCGATCTCTCATTCCGTGCATTGTGTCCGTTCTTCCGGTCACATGTGGAGGTTTTCACAATGCAATCGACCAGTAGAAGGAAGAGAAAACACGTGACC---------ACGACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGCGTTATCCATTGCGCCACAGGCCCCTGGACCCACTATCTCACTTCCTCACATCTTATCTTCTTCGCATCTTCATCACCTATCCTTCTTCC] [+] EMBL CD127866 [ATAGGTAGGTTGAGTGAGTGAGTGAGTGAGTGATTAACTAATTAATTCCAAGATGCAGGATCAGATCATCAGAAACATAATCATATTCATAATGCAGCATGATTATTGATGTGCAGCGAGTTCAGATGATCCGTCATTGTTGGC AGTCCTCAGAATTGCACAATTGCAACAAGATAACTTATTCATTTCGACTTCAGTATATATTCAAATTTGAATAGCTTCTCTTGAATTTTGTGTTAGTTTCTCACCGACACATTGTCATTTTCCAACTGTACTGAGATCTATTATTAATAATGATGAATAATGGCGTTGCATTTTACTTACTTATATGATGATAAGTATGTAAGAGAAGGAATTGTCGATCTCTCATTCCGTGCATTGTGTCCGTTCTTCCGGTCACATGTGGAGGTTTTCACAATGCAATCGACCAGTAGAAGGAAGAGAAAACACGTGACCACGACGACGACGACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAAAGGTGAGGTGGAGCGGAAAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGCGTTATCCATTGCGCCAC ] [-] EMBL CD088404 [ GTCATTG TGGCNAGTCNTCAGNAATGCACAATTGCAACAAGATAACTTATTCATTTCGACTTCAGTATATATTCAAATTTGAATAGCTTCTCTTGAATTTTGTGTTAGTTTCTCACCGACACATTGTCATTTTCCAACTGTACTGAGACCTATTATTAATAATGATGAATAATGGCGTTGCATTTCCCTTACTTATATGATGATAAGTATGTAAGAGAAGGAATTGTCGATCTCTCATTCCGTGCATTGTGTCCGTTCTTCCGGTCACATGTGGAGGTTTTCACAATGCAATCGACCAGTAGAAGGAAGAGAAAACACGTGACC ACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAAAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGCGTTATCCATTGCGCCACAGGCCCCTGGACCCACTATCTCACTTCCTCACATCTTATCTTCTTCGCATCTTCATCACCTATCCTTCTTCC] [-] EMBL CD088264 [ ATCTATTATTAATAATGATGAATAATGGCGTTGCATTTCACTTACCTATATGATGATAAGTATGTAAGAGAAGGAATTGTCGATCTCCCATTCCGTGCATTGTGTCCGTTCTTCCGGTCACATGTGGAGGTTTTCACAATGCAATCGACCAGTAGAAGGAAGAGAAAACACGTGACC ACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGCTGGTGTTGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAGTCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGCGTTATCCATTGCGCCACAGGTCCCTGGACCCACTATCTCACTTCCTCACATCTTATCTTCTTCGCATCTTCATCACCTATCCTTCTTCC] [-] EMBL CD088284 [ ATGATGAATAATGGCGTTGCACTTCACTTACTTATATGATGATAAGTATGTAAGAGAAGGAATTGTCGATCTCTCATTCCGTGCATTGTGTCCGTTCTTCCGGTCACATGTGGGGGTTTTCACAATGCAATCGACCAGTAGAAGGAAGAGAAAACACGTGACC ACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGCGTTATCCATTGCGCCACAGGCCCCTGGACCCACTATCTCACTTCCTCACATCTTATCTTCTTCGCATCTTCATCACCTATCCTTCTTCC] [-] EMBL CD093157 [ GAGAAAACACGTGACC ACGACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGC ] [-] EMBL CD093159 [ GAGAAAACACGTGACC ACGACGACGACGACGACGACGTGGATGTTCACTTTGAATGCATCTGTGGTCAGCTATCCTCGATGCACTACCAGTGTGTTCGGTCGCGTGAATTCCCTATGACGTTGGTGATGTAGAGGTGAGGTGGAGCGGAGAATGTGGGAGATGGTTGTGTGATGAGAGTGTATTTGCGACACGACTAGTTGAAAAGTGTAATCGAGCCTGCCAGGATTCGAACCTGGAATCTCCTGATCCGTAGTCAGGCGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||