Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8110 cluster # 8110       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8110#0 length = 755 sequences # 6  

consensusID : consensus_8110#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 755
fasta sequence
                              [ATTGTTCAATATCAAAATTGGAAGTGTCATCTGGACTGGTGACTTCGGGGATGTACGGAGGAATTTGTTCATGAATATGTTCCCAATCGATGCCATTAAAAAAGCATGACCCTTCAACTCATCTATTCCATTTCGACCAAACCTTCGTTTCCGATCACAAATCAGGTGTCGTATTAGGTCACATGCTGATTCGGAAATTTTTACACAATCAGTCGGAATGGTAAAATGTTTCTCAAAGTTCATAATGTGACTATAAGTTTCGATGAGATTTTCACTGTAGAAAGGCGTTTCGCCGAAGAGCATTTCGTACATCACGACTCCGAGAGACCAGTAATCACACTCAACACCATATGTCCCATGGCCATCTTCGGAAGCCCGCAAAATTTCTGGTGATAT-ATAGTCTGGTGTCCCAACGGCTGTATTG-TTTTTCACTAACCCA-TTTTCGCCAAG-TTTTAAACAGGAACCAAAATCAGCAAGGACAATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTTTATATCTCTGTGAACATAACCCAGTTGATGTAAAGAGTCAATGGCTAATACCATTTCAGAAACGTAGAACTGTACAATGTTTTCAGGTATCTTGTCGTCAAACTTGCTCAGCATTGTAAGCATATCCCCGCCATTGTAAAAATCCATGAGAAAATACAAAAACTTTTCGTCCTGAAATGTGTGATGCAATTTGGCCAGCCATAGAGATTTACTGACCATTGCCTTCACCATTACAT]

[-] EMBL CD166954             [ATTGTTCAATATCAAAATTGGAAGTGTCATCTGGACTGGTGACTTCGGGGATGTACGGAGGAATTTGTTCATGAATATGTTCCCAATCGATGCCATTAAAAAAGCATGACCCTTCAACTCATCTATTCCATTTCGACCAAACCTTCGTTTCCGATCACAAATCAGGTGTCGTATTAGGTCACATGCTGATTCGGAAATTTTTACACAATCAGTCGGAATGGTAAAATGTTTCTCAAAGTTCATAATGTGACTATAAGTTTCGATGAGATTTTCACTGTAGAAAGGCGTTTCGCCGAAGAGCATTTCGTACATCACGACTCCGAGAGACCAGTAATCACACTCAA                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD201117             [                                                                                                      AGCATGACCCTTCAACTCATCTATTCCATTTCGACCAAACCTTCGTTTCCGATCACAAATCAGGTGTCGTATTAGGTCACATGCTGATTCGGAAATTTTTACACAATCAGTCGGAATGGTAAAATGTTTCTCAAAGTTCATAATGTGACTATAAGTTTCGATGAGATTTTCACTGTAGAAAGGCGTTTCGCCGAAGAGCATTTCGTACATCACGACTCCGAGAGACCAGTAATCACGCTCAACACCATATGTCCCATGGCCATCTTCGGAAGCCCGCAAAATTTCTGGTGATAT ATAGTCTGGTGTCCCAACGGCTGTATTG TTTTTCACTAACCCA TTTTCGCCAAG TTTTAAACAGGAACCAAAATCAGCAAGGACAATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTNTATGTCTCTGTGAACATAACCCAGTTGATGTAAAGAGTCAATGGCTAATACCATTTCAGAAACGTAGAACTGTACAATGTTTTCAGGTATCTTGTCGTCAAACTTGCTCAGCATTGTAAGCATATCCCCGCCATTGGTAAAATCCATGAGAAAACACAAAAACTTTTCGTCCTG                                                              ]
[+] EMBL CD132348             [                                                                                                                                                                                                                                                                                              GTTTCGCCGAAGAGCATTTCGCACATCACGACTCCGAGAGACCAGTAATCACACTCAACACCATATGTCCCATGGCCATCTTCGGAAGCCCGCAAAATTTCTGGTGATAT ATAGTCTGGTGTCCCAACGGCTGTATTG TTTTTCACTAACCCA TTTTCGCCAAG TTTTAAACAGGAACCAAAATCAGCAAGGACAATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTTTATATCTCTGTGAACATAACCCAGTTGATGTAAAGAGTCAATGGCTAATACCATTTCAGAAACGTAGAACTGTACAATGTTTTCAGGTATCTTGTCGTCAAACTTGCTCAGCATTGTAAGCATATCCCCGCCATTGTAAAAATCCATGAGAAAATACAAAAACTTTTCGTCCTGAAATGTGTGATGCAATTTGGCCAGCCATAGAGATTTACT                       ]
[-] EMBL CD092313             [                                                                                                                                                                                                                                                                                                                                                                        GCCATCTTCGGAAGCCCGCAAAATTTCTGGTGATATAATAGTCTGGTGTCCCAACGGCTGTATTGTTTTTTCACTAACCCATTTTTCGCCAAGTTTTTAAGCAGGAACCAAAATCAGCAAGGACAATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTTTATATCTCTGTGAACATAACCCAGTTGATGTAAAGAGT                                                                                                                                                                                                      ]
[+] EMBL CD089320             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTTAAACAGGAACCAAAATCAGCAAGGACAATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTTTATATCTCTGTGAACATAACCCAGTTGATGTAAAGAGTCAATGGCTAATACCATTTCAGAAACGTAGAACTGTACAATGTTTTCAGGTATCTTGTCGTCAAACTTGCTCAGCATTGTAAGCATATCCCCGCCATTGTAAAAATCCATGAGAAAATACAAAAACTTTTCGTCCTGAAATGTGTGATGCAATTTGGCCAG                                      ]
[+] EMBL CD160849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCATATCCCCGCCATTGTAAAAATCCATGAGAAAATACAAAAACTTTTCGTCCTGAAATGTGTGATGCACTTTGGCCAGCCATAGAGATTTACTGACCATTGCCTTCACCATTACAT]


>consensus_8110#0 ATTGTTCAATATCAAAATTGGAAGTGTCATCTGGACTGGTGACTTCGGGGATGTACGGAG GAATTTGTTCATGAATATGTTCCCAATCGATGCCATTAAAAAAGCATGACCCTTCAACTC ATCTATTCCATTTCGACCAAACCTTCGTTTCCGATCACAAATCAGGTGTCGTATTAGGTC ACATGCTGATTCGGAAATTTTTACACAATCAGTCGGAATGGTAAAATGTTTCTCAAAGTT CATAATGTGACTATAAGTTTCGATGAGATTTTCACTGTAGAAAGGCGTTTCGCCGAAGAG CATTTCGTACATCACGACTCCGAGAGACCAGTAATCACACTCAACACCATATGTCCCATG GCCATCTTCGGAAGCCCGCAAAATTTCTGGTGATATATAGTCTGGTGTCCCAACGGCTGT ATTGTTTTTCACTAACCCATTTTCGCCAAGTTTTAAACAGGAACCAAAATCAGCAAGGAC AATGTGACCTGAGCTTTGTAGCAACACATTATCTGGCTTTATATCTCTGTGAACATAACC CAGTTGATGTAAAGAGTCAATGGCTAATACCATTTCAGAAACGTAGAACTGTACAATGTT TTCAGGTATCTTGTCGTCAAACTTGCTCAGCATTGTAAGCATATCCCCGCCATTGTAAAA ATCCATGAGAAAATACAAAAACTTTTCGTCCTGAAATGTGTGATGCAATTTGGCCAGCCA TAGAGATTTACTGACCATTGCCTTCACCATTACAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)