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Schistosoma mansoni
cluster # 8124 cluster # 8124       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8124#0 length = 1339 sequences # 3  
consensus_8124#1 length = 680 sequences # 1  
consensus_8124#2 length = 618 sequences # 1  
consensus_8124#3 length = 367 sequences # 1  

consensusID : consensus_8124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1339
fasta sequence
                              [CTCGCCATTGCCTGAGCATGCCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACAAGGAATATGTTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGCATTTATATATTTTCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGG-ACTACATGATCGTATTGTTCGCATTGA-TACAGCTACACTGAGCGACCACACAATCCTACACCTGGAAT-TATATGGGCAAAGAAAAACGACTAAATCATGGCGTATCTGGACGCCGGTCGAACTTTGCAGAGCACCAGAGATCTACGTACGGGGATAGAAGTTCCAGATCACGTCCTTCTCAAAGAGTATCTCGACGTTCAACAGGTGAGCGACCTGATCGTTACCATCAGTCCCCAGAGGAAAACAGCCGACCTCGTAATTCGTTAGCATACAATTCAAATAGCCGTAGTCGCATAGTGAGAACAAACAATGGTGTCCAACAAAGTCGTTCTCGTCAACCACGTTCTAATGTGATTCGTAATGCGTATAACATGCGACGCCAACCTAAAAATGAGTTTGCGTCTATGAACTACAGCTCTACAACACACTGATAGCAAAATGCATTTAAATTTATACCACTGTATCTTTAAAAAATAGACTTATTGTATTTACGTGAAAACTGGCTGAATATCACTACTGCTTTCCATTATGTTGTTGGTTTTCAGTTAATTTGATTGTGTAATTCAATTTCATTGGGACAGTAAACGTGTACGTCGTCTTTCATTATTTAAGAACTGTTTTACGCGTTAGCTACAGTGCTTACTACGTTTATGAAGAACAAGAGTGGCTCAATACCAAGTATCTAATCAAATGAAGTTGAGTTTTCTCCTCTTTTCTCACTACTTTTAATGAATAGTATATTGGAAAGAAAATGAGTGAAATAGTATTAGAATAAATCGATTAATCTCATGAAATTTCCTAGATGTACATTGGAGAGTGGGATTTGGATCTTTACATGCTACTGAGA]

[+] EMBL BF936755             [CTCGCCATTGCCTGAGCATGCCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACAAGGAATATGTTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGCATTTATATATTTTCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGG ACTACATGATCGTATTGTTCGCATTGA TACAGCTACACTGAGCGACCACACAATCCTACACCTGGAAT TAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD074770             [                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCATTTATATATTTTCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGAACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGCAAAGAAAAACGACTAAATCATGGCGTATCTGGACGCCGGTCGAACTTTGCAGAGCACCAGAGATCTACGTACGGGGATAGAAGTTCCAGATCACGTCCTTCTCAAAGAGTATCTCGACGTTCAACAGGTGAGCGACCTGATCGTTACCATCAGTCCCCAGAGGAAAACAGCCGACCTCGTAATTCGTTAGCATACAATTCAAATAGCCGTAGTCGCATAGTGAGAACAAACAATGGTGTCCAACAAAGTCGTTCTCGTCAACCACGTTCTAATGTGATTCGTAATGCGTATAACATGCGACGCCAACCTAAAAATGAGTTTGCGTCTATGAACTACAGCTCTACAACACACTGATAGCAAAATGCATTTAAATTTATACCACTGTATCTTTAAAAAATAGACTTATTGTATTTACGTGAAAACTGGCTGAATATCACTACTG                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD112570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCGTATAACATGCGACGCCAACCTAAAAATGAGTTTGCGTCTATGAACTACAGCTCTACAACACACTGATAGCAAAATGCATTTAAATTTATACCACTGTATCTTTAAAAAATAGACTTATTGTATTTACGTGAAAACTGGCTGAATATCACTACTGCTTTCCATTATGTTGTTGGTTTTCAGTTAATTTGATTGTGTAATTCAATTTCATTGGGACAGTAAACGTGTACGTCGTCTTTCATTATTTAAGAACTGTTTTACGCGTTAGCTACAGTGCTTACTACGTTTATGAAGAACAAGAGTGGCTCAATACCAAGTATCTAATCAAATGAAGTTGAGTTTTCTCCTCTTTTCTCACTACTTTTAATGAATAGTATATTGGAAAGAAAATGAGTGAAATAGTATTAGAATAAATCGATTAATCTCATGAAATTTCCTAGATGTACATTGGAGAGTGGGATTTGGATCTTTACATGCTACTGAGA]


>consensus_8124#0 CTCGCCATTGCCTGAGCATGCCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATG TTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACT ACAATCCAAACAAGGAATATGTTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATA TGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGA GAAAACGTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAAACCATCTCGTGTAC TTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAA AATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTG GTTTCGCATTTATATATTTTCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCG CTCGAGGCTTGGACTACATGATCGTATTGTTCGCATTGATACAGCTACACTGAGCGACCA CACAATCCTACACCTGGAATTATATGGGCAAAGAAAAACGACTAAATCATGGCGTATCTG GACGCCGGTCGAACTTTGCAGAGCACCAGAGATCTACGTACGGGGATAGAAGTTCCAGAT CACGTCCTTCTCAAAGAGTATCTCGACGTTCAACAGGTGAGCGACCTGATCGTTACCATC AGTCCCCAGAGGAAAACAGCCGACCTCGTAATTCGTTAGCATACAATTCAAATAGCCGTA GTCGCATAGTGAGAACAAACAATGGTGTCCAACAAAGTCGTTCTCGTCAACCACGTTCTA ATGTGATTCGTAATGCGTATAACATGCGACGCCAACCTAAAAATGAGTTTGCGTCTATGA ACTACAGCTCTACAACACACTGATAGCAAAATGCATTTAAATTTATACCACTGTATCTTT AAAAAATAGACTTATTGTATTTACGTGAAAACTGGCTGAATATCACTACTGCTTTCCATT ATGTTGTTGGTTTTCAGTTAATTTGATTGTGTAATTCAATTTCATTGGGACAGTAAACGT GTACGTCGTCTTTCATTATTTAAGAACTGTTTTACGCGTTAGCTACAGTGCTTACTACGT TTATGAAGAACAAGAGTGGCTCAATACCAAGTATCTAATCAAATGAAGTTGAGTTTTCTC CTCTTTTCTCACTACTTTTAATGAATAGTATATTGGAAAGAAAATGAGTGAAATAGTATT AGAATAAATCGATTAATCTCATGAAATTTCCTAGATGTACATTGGAGAGTGGGATTTGGA TCTTTACATGCTACTGAGA



consensusID : consensus_8124#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence
                              [GAATTCGGCACGAGGAGATAGGTGGTCGGTTGTTTATCTAAACTTTTAGAAGCCAACATATTCGAATCGAGATAGTGGACGGGACTACCGTAACGGTTCTCGCCATCCTGAGCATGCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATNNNNNNNNNNACTACTACAATCCAAACAAGGAATATGTTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGNNNNNNNNAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGCANAGAAAAACGACTAAATCATGGCGTATCTGGACGCCGGTCGA]

[+] EMBL CD080936             [GAATTCGGCACGAGGAGATAGGTGGTCGGTTGTTTATCTAAACTTTTAGAAGCCAACATATTCGAATCGAGATAGTGGACGGGACTACCGTAACGGTTCTCGCCATCCTGAGCATGCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATNNNNNNNNNNACTACTACAATCCAAACAAGGAATATGTTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGNNNNNNNNAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGCANAGAAAAACGACTAAATCATGGCGTATCTGGACGCCGGTCGA]


>consensus_8124#1 GAATTCGGCACGAGGAGATAGGTGGTCGGTTGTTTATCTAAACTTTTAGAAGCCAACATA TTCGAATCGAGATAGTGGACGGGACTACCGTAACGGTTCTCGCCATCCTGAGCATGCATA TGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTT CGAAAATGACTTAAAAGATNNNNNNNNNNACTACTACAATCCAAACAAGGAATATGTTTC CCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCG GTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGNNN NNNNNAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGCTTTTGGATTGTCCATGCG CACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAA ACTTGTTCAAGATAATTTATCTGGGCCGGTCTATTGAATGTGCTCGTGCAGCGCGCGCTG CATGCGCTCGAGGCTTGGACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGA GCGACCACACAATCCTACACCTGGAATATATATGGGCANAGAAAAACGACTAAATCATGG CGTATCTGGACGCCGGTCGA



consensusID : consensus_8124#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [TTTTAGAAGCCAAGTCCTAAATGGCCTACGACATGATATCATATACCGTAACGGTTCTCGCCATGCTGAGCATGCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACNNNNNNNNNNNNTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAANNNNNNNNTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGCATTTTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGAACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGNCAAGAAAAACGAAATGAATANT]

[+] EMBL CD080879             [TTTTAGAAGCCAAGTCCTAAATGGCCTACGACATGATATCATATACCGTAACGGTTCTCGCCATGCTGAGCATGCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACNNNNNNNNNNNNTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGAAGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAANNNNNNNNTGTACTTGGTGCTTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGCATTTTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGAACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGNCAAGAAAAACGAAATGAATANT]


>consensus_8124#2 TTTTAGAAGCCAAGTCCTAAATGGCCTACGACATGATATCATATACCGTAACGGTTCTCG CCATGCTGAGCATGCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATT CCAGTCACGAATGCCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCC AAACNNNNNNNNNNNNTTCCCCCAGTAAAGAACTTCGACGTAGTAAACATGATATGGAGA AGTTTCGCCAAGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAAC GTAGTAAAATGGATAGTCGAGTCGAATCATCTCCTCCCAANNNNNNNNTGTACTTGGTGC TTTTGGATTGTCCATGCGCACCGAGGAACGGCATTTGTACGACATAATGAAAAAATACGG CGAAATAGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGC ATTTTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGGAACTACATGATCGTATTGTTCGCA TTGATTACAGCTACACTGAGCGACCACACAATCCTACACCTGGAATATATATGGGNCAAG AAAAACGAAATGAATANT



consensusID : consensus_8124#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence
                              [ATTCTATATTGGATCAAAATTATAATATTGAATAAAGCTAATAATGATAAATAAATAAACAATTTTTAAAAACATTCTTATCATTTGAAAAAGACAATTGAATTCTATGTATATAAAGAGAAATGGAGCTTCCATTTTTAACTCAATAGTGAATAACTTGATGGTATAATGGTTGGAATTAGGGGCTTTCGATAGATTGATTTAGTATTATAATATATATATGGGAATTGGACGATATCAAAATATTTTCTATTATTTAGGGAGTTATATTCATTTCGTTTTTCTTTGCCCATATATATTCCAGGGGTAGGATTGGGGGGGCGCTCAATGGAGCTGTAATCAATGCGAACAATACGATCATGTAGTT]

[+] EMBL CD074713             [ATTCTATATTGGATCAAAATTATAATATTGAATAAAGCTAATAATGATAAATAAATAAACAATTTTTAAAAACATTCTTATCATTTGAAAAAGACAATTGAATTCTATGTATATAAAGAGAAATGGAGCTTCCATTTTTAACTCAATAGTGAATAACTTGATGGTATAATGGTTGGAATTAGGGGCTTTCGATAGATTGATTTAGTATTATAATATATATATGGGAATTGGACGATATCAAAATATTTTCTATTATTTAGGGAGTTATATTCATTTCGTTTTTCTTTGCCCATATATATTCCAGGGGTAGGATTGGGGGGGCGCTCAATGGAGCTGTAATCAATGCGAACAATACGATCATGTAGTT]


>consensus_8124#3 ATTCTATATTGGATCAAAATTATAATATTGAATAAAGCTAATAATGATAAATAAATAAAC AATTTTTAAAAACATTCTTATCATTTGAAAAAGACAATTGAATTCTATGTATATAAAGAG AAATGGAGCTTCCATTTTTAACTCAATAGTGAATAACTTGATGGTATAATGGTTGGAATT AGGGGCTTTCGATAGATTGATTTAGTATTATAATATATATATGGGAATTGGACGATATCA AAATATTTTCTATTATTTAGGGAGTTATATTCATTTCGTTTTTCTTTGCCCATATATATT CCAGGGGTAGGATTGGGGGGGCGCTCAATGGAGCTGTAATCAATGCGAACAATACGATCA TGTAGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8124#1      GAATTCGGCACGAGGAGATAGGTGGTCGGTTGTTTATCTAAACTTTTAGAAGCCAA--CA 58
consensus_8124#2      -------------------------------------------TTTTAGAAGCCAAGTCC 17
consensus_8124#0      ------------------------------------------------------------
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      TATTCGAATCGAGATAGTGGACGGGACTACCGTAACGGTTCTCGCCAT--CCTGAGCATG 116
consensus_8124#2      TAAATGGCCTACGACATGATATCATA-TACCGTAACGGTTCTCGCCAT--GCTGAGCATG 74
consensus_8124#0      ----------------------------------------CTCGCCATTGCCTGAGCATG 20
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      C-ATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATG 175
consensus_8124#2      C-ATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATG 133
consensus_8124#0      CCATATGAAAATTCTGTTTCAAGAAAACGCTATCGGGATGTTCCATTCCAGTCACGAATG 80
consensus_8124#3      ----------ATTCTATATTGGATCAAAATTATAATATTGAATAAAGCTAATAATGATAA 50
                                ***** * *      **   ***     **    *  * * * * **   

consensus_8124#1      CCTTTCGAAAATGACTTAAAAGATNNNNNNNNNNACTACTACAATCCAAACAAGGAATAT 235
consensus_8124#2      CCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACNNNNNNNNN 193
consensus_8124#0      CCTTTCGAAAATGACTTAAAAGATAGGGAATATGACTACTACAATCCAAACAAGGAATAT 140
consensus_8124#3      --ATAAATAAACAATTTTTAAAAACATTCTTATCATTTGAAAAAGACAATTGAATTCTAT 108
                         *    ***  * **  ** *           * *   * **  ***           

consensus_8124#1      GTTT-CCCCCAGTAA-AGAACTTCGACGTAGTAAACATGATATGGAGAAGTTT--CGCCA 291
consensus_8124#2      NNNTTCCCCCAGTAA-AGAACTTCGACGTAGTAAACATGATATGGAGAAGTTT--CGCCA 250
consensus_8124#0      GTTT-CCCCCAGTAA-AGAACTTCGACGTAGTAAACATGATATGGAGAAGTTT--CGCCA 196
consensus_8124#3      GTATATAAAGAGAAATGGAGCTTCCATTT--TTAACTCAATAGTGAATAACTTGATGGTA 166
                         *      ** **  ** **** *  *  * ***   ***  **  *  **   *  *

consensus_8124#1      AGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAAT 351
consensus_8124#2      AGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAAT 310
consensus_8124#0      AGACCCGCGGTACAGTCGTGATTCAAACACTAGTCCTGTCCCGAGAAAACGTAGTAAAAT 256
consensus_8124#3      TAATGGTTGGAATTAGGGGCTTTCGATAGATTGATTTAGTATTATAATATATA-TATGGG 225
                        *     ** *     *   *** *    * *   *      * ** *  ** **    

consensus_8124#1      GGATAGNNNN-NNNNAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGC-TTTTGGA 409
consensus_8124#2      GGATAGTCGA-GTCGAATCATCTCCTCCCAANNNNNNNN-TGTACTTGGTGC-TTTTGGA 367
consensus_8124#0      GGATAGTCGA-GTCGAATCATCTCCTCCCAAACCATCTCGTGTACTTGGTGC-TTTTGGA 314
consensus_8124#3      AATTGGACGATATCAAAATATTTTCTATTATTTAGGGAGTTATATTCATTTCGTTTTTCT 285
                         * *         **  ** * **   *          * ** *   * * ****   

consensus_8124#1      TTGTCCATGCGCAC-CGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAAT 468
consensus_8124#2      TTGTCCATGCGCAC-CGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAAT 426
consensus_8124#0      TTGTCCATGCGCAC-CGAGGAACGGCATTTGTACGACATAATGAAAAAATACGGCGAAAT 373
consensus_8124#3      TTGCCCATATATATTCCAGGGGTAGGATTGGGGGGGCGCTCAATGGAGCTGT----AATC 341
                      *** ****    *  * ***    * *** *   * *         *  *      **  

consensus_8124#1      AGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCC--------------------- 507
consensus_8124#2      AGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGC---------------------- 464
consensus_8124#0      AGAGGAAATAAAACTTGTTCAAGATAATTTATCTGGGCGTTCACGTGGTTTCGCATTTAT 433
consensus_8124#3      AATGCGAACAATAC--GATCATG-TAGTT------------------------------- 367
                      *  *  ** ** **  * *** * ** **                               

consensus_8124#1      --------GGTCTATTGAATGTGC-TCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGG 558
consensus_8124#2      --------GTTCACGTGGTTTCGCATTTTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGG 516
consensus_8124#0      ATATTTTCGGTCTATTGAATGTGC-TCGTGCAGCGCGCGCTGCATGCGCTCGAGGCTTGG 492
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      A-CTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTA 617
consensus_8124#2      AACTACATGATCGTATTGTTCGCATTGATTACAGCTACACTGAGCGACCACACAATCCTA 576
consensus_8124#0      A-CTACATGATCGTATTGTTCGCATTGAT-ACAGCTACACTGAGCGACCACACAATCCTA 550
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      CACCTGGAATATATATGGGCANAGAAAAACGAC-TAAATCATGGCGTATCTGGACGCCGG 676
consensus_8124#2      CACCTGGAATATATATGGGNCAAGAAAAACGAAATGAATANT------------------ 618
consensus_8124#0      CACCTGGAAT-TATATGGGCAAAGAAAAACGAC-TAAATCATGGCGTATCTGGACGCCGG 608
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      TCGA-------------------------------------------------------- 680
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCGAACTTTGCAGAGCACCAGAGATCTACGTACGGGGATAGAAGTTCCAGATCACGTCCT 668
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCTCAAAGAGTATCTCGACGTTCAACAGGTGAGCGACCTGATCGTTACCATCAGTCCCCA 728
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      GAGGAAAACAGCCGACCTCGTAATTCGTTAGCATACAATTCAAATAGCCGTAGTCGCATA 788
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      GTGAGAACAAACAATGGTGTCCAACAAAGTCGTTCTCGTCAACCACGTTCTAATGTGATT 848
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      CGTAATGCGTATAACATGCGACGCCAACCTAAAAATGAGTTTGCGTCTATGAACTACAGC 908
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCTACAACACACTGATAGCAAAATGCATTTAAATTTATACCACTGTATCTTTAAAAAATA 968
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      GACTTATTGTATTTACGTGAAAACTGGCTGAATATCACTACTGCTTTCCATTATGTTGTT 1028
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      GGTTTTCAGTTAATTTGATTGTGTAATTCAATTTCATTGGGACAGTAAACGTGTACGTCG 1088
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCTTTCATTATTTAAGAACTGTTTTACGCGTTAGCTACAGTGCTTACTACGTTTATGAAG 1148
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      AACAAGAGTGGCTCAATACCAAGTATCTAATCAAATGAAGTTGAGTTTTCTCCTCTTTTC 1208
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCACTACTTTTAATGAATAGTATATTGGAAAGAAAATGAGTGAAATAGTATTAGAATAAA 1268
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      ------------------------------------------------------------
consensus_8124#2      ------------------------------------------------------------
consensus_8124#0      TCGATTAATCTCATGAAATTTCCTAGATGTACATTGGAGAGTGGGATTTGGATCTTTACA 1328
consensus_8124#3      ------------------------------------------------------------
                                                                                  

consensus_8124#1      -----------
consensus_8124#2      -----------
consensus_8124#0      TGCTACTGAGA 1339
consensus_8124#3      -----------
                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)