These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8170#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1086 fasta sequence [TTATTATGGCGATCTAGATCAGGATTAAAATACACAGCTTGTCCAGAAGATTTGATGAAAATGATCAATGGATTGAATCAAGCTCATATTCGATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCATATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCACCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTATTTCTCTACGATTAAATTAAAATCATTCAATCAGCCCATGATAATGTTAATGTTCCACATTCAAATTATACATCTTGTTT] [+] EMBL CD178202 [TTATTATGGCGATCTAGATCAGGATTAAAATACACAGCTTGTCCAGAAGATTTGATGAAAATGATCAATGGATTGAATCAAGCTCATATTCGATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTNTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTcc ] [+] EMBL CD162807 [ ATTCAATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCAT ] [+] EMBL CD190800 [ GCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAGGAGGCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTAATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGT ] [-] EMBL CD139558 [ CTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAA ] [+] EMBL CD151730 [ ACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCATATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCACCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTATTTCTCTACGATT ] [+] EMBL AI975264 [ AAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCTTATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCATCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTAATTCTTTACGATTAAATTAAAATCATTCAATCAGCCCATGATAATGTTAATGTTCCACATTCAAATTATACATCTTGTTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||