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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8170 cluster # 8170       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8170#0 length = 1086 sequences # 6  

consensusID : consensus_8170#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1086
fasta sequence
                              [TTATTATGGCGATCTAGATCAGGATTAAAATACACAGCTTGTCCAGAAGATTTGATGAAAATGATCAATGGATTGAATCAAGCTCATATTCGATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCATATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCACCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTATTTCTCTACGATTAAATTAAAATCATTCAATCAGCCCATGATAATGTTAATGTTCCACATTCAAATTATACATCTTGTTT]

[+] EMBL CD178202             [TTATTATGGCGATCTAGATCAGGATTAAAATACACAGCTTGTCCAGAAGATTTGATGAAAATGATCAATGGATTGAATCAAGCTCATATTCGATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTNTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD162807             [                                                                                       ATTCAATGTCCTGTCTTATATCGTACACTGAAACTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAAAATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD190800             [                                                                                                                                                                                                                  GCACTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAGGAGGCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTAATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD139558             [                                                                                                                                                                                                                     CTATCTAAACTAGAATCAGATCAAATTAGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAATTGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCATTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCTACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGTAACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTGACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD151730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCATATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCACCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTATTTCTCTACGATT                                                                   ]
[+] EMBL AI975264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAATTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAAACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAATCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCCCCTCCTCGCTCTCAACCTTATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCATTCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCATCATCATCACAAATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAATCCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTAATTCTTTACGATTAAATTAAAATCATTCAATCAGCCCATGATAATGTTAATGTTCCACATTCAAATTATACATCTTGTTT]


>consensus_8170#0 TTATTATGGCGATCTAGATCAGGATTAAAATACACAGCTTGTCCAGAAGATTTGATGAAA ATGATCAATGGATTGAATCAAGCTCATATTCGATGTCCTGTCTTATATCGTACACTGAAA CTTCCACTTTTACCTCAAAGTACACATTTTTCACCTCATTCTGACATAGTTAATATAGAA AATAACAATGGGATACTGAATGACGACAGTGCACTATCTAAACTAGAATCAGATCAAATT AGTCCTGATCAAATGCCTTATGTGTATGTAAGCTGTGGTCATGTACACGGCTGGCATAAT TGGCGTGCAGTTGGTGATGTAAACAGTCGTCGAACATGTCCATTATGTTTACAGACATCA TTGTTTATCCCATTACGTATGGGTATTGAATCAGCATTCTATGTTGATCGTAGTTTAGCT ACGCATTGTTTTAATCCTTGTGGACATATTGCTTCAGAAAATACTGTACGATACTGGTGT AACTTACAATTATTAAATCGATATAATTTTGAATTACACGCAAGATGCCCATTTTGTTTG ACGCAAATACATTCAAAACCAGTGAAATTATTATTTCAAAGTGATTTATCAGAAGAAGAA TTCTTGGAATTAATTAAAGAACAATTATACGTGCGTACATTAAATATGGAAAAATATGAA ACATTATCACGTTCTGTTCATAAAGTAAATAATAGATCATCAAAAATGAATTCATCACAA TCCCATTCCACTTCTAATAATAACAGTAATCAAGAGTCTGTTCATTCGTCTTCGTCTTCC CCTCCTCGCTCTCAACCATATCCTACATCTTCTTCCCACAGTCATGATGATCGTCTTCAT TCTTCATCATGTTCATCATCTGATGAAGTATTATTATCTTCTACATCACCATCATCACAA ATTATATCATCATCACCAACTACCTCTTATTTATTAAATAATATTCACTCATCAAGTAAT CCTTGTCGATCGGCAGCAGTAGTAGTAGCATCACAAGAAAATTCTATTTCTCTACGATTA AATTAAAATCATTCAATCAGCCCATGATAATGTTAATGTTCCACATTCAAATTATACATC TTGTTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)