Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8281 cluster # 8281       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8281#0 length = 593 sequences # 6  

consensusID : consensus_8281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 593
fasta sequence
                              [CGGCGCGCTACTTAAAAGGACGGTAGTATTTTGCTTCGTCGACCCTCCTCACTCTGCACTTCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAAACAGCATTCCCTTAGTTGCAGACCTTATAGTGAAGATGTAAAGGAAGATGAACATACCCATTCGACCTTAAACGCTTCAGATGATAGCGACGATGAATTTTTGACTCAATATCGACAGAACAGAATAAATGAACTAAGAAAAGCCAATGAAAGTCTACCAACTTTCAACAAGATCTATGATCTAGTAGCGGATACATTTATTGANGGAGATAG]

[+] EMBL CD083215             [CGGCTCGAGGATTAAAAGGACGGTAGTATTTTGCTTCGTCGATCCTCCTCACTCTGCACTTCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAAACAGCATTCCCTTAGTTGCAGACCTTATAGTGAAGATGTAAAGGAAGATGAACATACCCATTCGACCTTAAACGCTTCAGATGATAGCGACGATGAATTTTTGACTCAATATCGACAGAACAGAATAAATGAACTAAGAAAAGCCAATGAAAGTCTACCAACTTTCAACAAGATCTATGATCTAGTAGCGGATACATTTATTGANGGAGATAG]
[+] EMBL CD111377             [   CGCGCTACTTAAAAGGACGGCAGTATTTTGCTTCGTCGACTCTCCTCGCTCTGCACTTCATGCTCACCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGGAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAA                                                                                                                                                                                                                     ]
[+] EMBL CD110839             [   CGCGCTACTTAAGAGGACGGTAGTATTTTGCTTCGTCGAGCCTCCTCACTCTGCGCTGCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACGAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAA                                                                                                                                                                                                                     ]
[+] EMBL CD098395             [   CGCGCTACTTAAAAGGGCGGTAGTATTTTGCTTCGTCGACCCTCCTCACTCTGCACTTCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAA                                                                                                                                                                                                                     ]
[+] EMBL CD110923             [  ctGCGCTACTTAAAAGGACGGTAGTATTTTGCTTCGTCGTGACTCCTAAAACTGTGGTGCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAACCCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGCAGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGCTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAA                                                                                                                                                                                                                     ]
[+] EMBL CD149418             [                                                                                                                                                                                                     GGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATTGTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTAGTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGAAAAGTTGTCGAATATGCCAAACAGCATTCCCTTAGTTGCAGACCTTATAGTGAAGATGTTAAGGAAGATGAACATA                                                                                                                                                             ]


>consensus_8281#0 CGGCGCGCTACTTAAAAGGACGGTAGTATTTTGCTTCGTCGACCCTCCTCACTCTGCACT TCATGCTCTCCTAGTACATGAAGTACCTTCTGGCTAGACGAGAACCACTACAACCTAAAC CCTATGGCTTTATCGTTTGATGACAAACTTCTTGGCGAAAAGGTCCACAATTATTGTAGC AGCAGTGAAGGCGAAGAGGACAGTGGAGAGAGTGGAAGGGTAAGTAACCCTTCTACTATT GTTCCGGAAAGCTTGAAACCCCCCCGTCTTGGTTCTCCACAGACTGGGCCAAAGGGTGTA GTTGCTGATTATAAACGTTTTAAGAAACTGGAGAGTAGACGAAACGCTGAAAAAGAACGA AAAGTTGTCGAATATGCCAAACAGCATTCCCTTAGTTGCAGACCTTATAGTGAAGATGTA AAGGAAGATGAACATACCCATTCGACCTTAAACGCTTCAGATGATAGCGACGATGAATTT TTGACTCAATATCGACAGAACAGAATAAATGAACTAAGAAAAGCCAATGAAAGTCTACCA ACTTTCAACAAGATCTATGATCTAGTAGCGGATACATTTATTGANGGAGATAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)