These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8307#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1015 fasta sequence [GTCGACAAAATTTTAGAATCTAGAAAGGCATCTGAAGAGAAGTTACTTACTAAAGAAGCAGAATTTCAGAGTTTGCTTGCTACTTTTAATACGCTTAAAGGTCTTGAGTTGATTTTGGAACAGGAATCTTCCTCAAAACAGAAAACAAATGATATGGAAGAACGTGAAGTAACCACCACTGACAATCTATCTTATGTTAGTCGCACCTTAGAGGATGACGTAGAGATTAGCGACAAGTCAAGCACTGTTTCCGAAAGTGATTTAAATGAAGTCGATGAAAAGATTACAGAAAAATCTAGACTACAGAAGAATTTATCATTGCTCTTAGATGTTGGTCGTTTACACGCCCAAATCAGACTTAAAGATGAACAAATTAAAACTGAAGAATGTAGAGCAAAAAATGAACATGATCTTCGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGAGAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAAGCATGTCGTAGTTGGTTCGGAATCTTCCGAAGCCCTTAAGCACAGTCGAAAACGTAATCAAGAGCTTGAGGGGGAAGTGAAGGTATTACGAGATCAAATGGCAGCTTTACGTCGAGAGCTAGTGGAAACTGAAAG-ACTAGTAGACGTCAAATATCGGAGTTAGA-TAAGCGTTCTCATGAAAATTGGTTAGCAGCTCGTGCATCTGACCACCAAATTCAAGATCTGCGTGAAGAAAACTCCAGTTTGCGACAAAAGCTCATTGAATCAGAGAACAATGCATTACGATCGTCAATACACACCTTCCCGGAAAAAATAAATAGTTCATCTCGTGAAAAAATTATGAACATTTTCCCAAGACCTATTTTACCACAGGACGTAATGAAAAATTCAAGCTTAAGAGATGTACGCTCTCAATCAAGAAATTCTTTAGTANA] [+] EMBL CD116437 [GTCGACAAAATTTTAGAATCTAGAAAGGCATCTGAAGAGAAGTTACTTACTAAAGAAGCAGAATTTCAGAGTTTGCTTGCTACTTTTAATACGCTTAAAGGTCTTGAGTTGATTTTGGAACAGGAATCTTCCTCAAAACAGAAAACAAATGATATGGAAGAACGTGAAGTAACCACCACTGACAATCTATCTTATGTTAGTCGCACCTTAGAGGATGACGTAGAGATTAGC ] [+] EMBL BF936455 [ AATTTCAGAGTTTGCTTGCTACTTTTAATACGCTTAAAGGTCTTGAGTTGATTTTGGAACAGGAATCTTCCTCAAAACAGAAAACAAATGATATGGAAGAACGTGAAGTAACCACCACTGACAATCTATCTTATGTTAGTCGCACCTTAGAGGATGACGTAGAGATTAGCGACAAGTCAAGCACTGTTTCCGAAAGTGATTTAAATGAAGTCGATGAAAAGATTACAGAAAAATCTAGACTACAGAAGAATTTATCATTGCTCTTAGATGTTGGTCGTTTACACGCCCAAATCAGACTTAAAGATGAACAAATTAAAACTGAAGAATGTAGAGCAAAAAATGAACATGATCTTCGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGAGAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAAGCATGTCGTAGTTGGTTCGGAATCTTCCGAAGCCCTTAAGCACAGTCGAAAACGTAATCAAGAGCTTGAGGGGGAAGTGAAGGTATTACGAGATCAAATGGCAGCTTTACGTCGAGAGCTAGTGGAAACTGAAAG ACTAGTAGACGTCAAATATCGGAGTTAGATTAAGCGTT ] [+] EMBL AI976453 [ AATTTCAGAGTTTGCTTGCTACTTTTAATACGCTTAAAGGTCTTGAGTTGATTTTGGAACAGGAATCTTCCTCAAAACAGAAAACAAATGATATGGAAGAACGTGAAGTAACCACCACTGACAATCTATCTTATGTTAGTCGCACCTTAGAGGATGACGTAGAGATTAGCGACAAGTCAAGCACTGTTTCCGAAAGTGATTTAAATGAAGTCGATGAAAAGATTACAGAAAAATCTAGACTACAGAAGAATTTATCATTGCTCTTAGATGTTGGTCGTTTACACGCCCAAATCAGACTTAAAGATGAACAAATTAAAACTGAAGAATGTAGAGCAAAAAATGAACATGATCTTCGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGAGAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAAGCATGTCGTAGTTGGTTCGGAATCTTCCGAAGCCCTTAAGCACAGTCGAAAACGTAATCAAGAGCTTGAGGGGGAAGTGAGGGTATTACGAGATCAAA ] [+] EMBL AI975607 [ AATTTCAGAGTTTGCTTGCTACTTTTAATACGCTTAAAGGTCTTGAGTTGATTTTGGAACAGGAATCTTCCTCAAAACAGAAAACAAATGATATGGAAGAACGTGAAGTAACCACCACTGACAATCTATCTTATGTTAGTCGCACCTTAGAGGATGACGTAGAGATTAGCGACAAGTCAAGCACTGTTTCCGAAAGTGATTTAAATGAAGTCGATGAAAAGATTACAGAAAAATCTAGACTACAGAAGAATTTATCATTGCTCTTAGATGTTGGTCGTTTACACGCCCAAATCAGACTTAAAGATGAACAAATTAAAACTGAAGAATGTAGAGCAAAAAATGAACATGATCTTCGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGAGAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAA ] [+] EMBL CD078991 [ CGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGACAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAAGCATGTCGTAGTTGGTTCGGAATCTTCCGAAGCCCTTAAGCACAGTCGAAAACGTAATCAAGAGCTTGAGGGGGAAGTGAAGGTATTACGAGATCAAATGGCAGCTTTACGTCGAGAGCTAGTGGAAACTGAAAGAACTAGTAGACGTCAAATATCGGAGTTAGA TAAGCGTTCTCATGAAAATTGGTTAGCAGCTCGTGCATCTGACCACCAAATTCAAGATCTGCGTGAAGAAAACTCCAGTTTGCGACAAAAGCTCATTGAATCAGAGAACAATGCATTACGATCGTCAATACACACCTTCCCGGAAAAAATAAATAGTTCATCTCGTGAAAAAATTATGAACATTTTCCCAAGACCTATTTTACCACAGGACGTAATGAAAAATTCAAGCTTAAGAGATGTACGCTCTCAATCAAGAAATTCTTTAGTANA] [-] EMBL CD093829 [ CGAGTTCAAGTTGAGTCCAAAATGGAAGAGATAGAAAGAGAAAATTCAACTCTTAAAGCTAATTTAATTCAGATTGAAGAAGAAAAAAATGCTTATCAAACAAAGCTTGACATTTTATCCTGTTACTTTAAAGAACGTGAACTTGAACTGCAGAGGGATTTGGGAAAGCATGTCGTAGTTGGTTCGGAATCTTCCGAAGCCCTTAAGCACAGTCGAAAACGTAATCAAGAGCTTGAGGGGGAAGTGAAGGTATTACGAGATCAAATGGCAGCTTTACGTCGAGAGCTAGTGGAAACTGAAAGAACTAGTAGACGTCAAATATCGGAGTTAGA TAAGCGTTCTCATGAAAATTGGTTAGCAGCTCGTGCATCTGACCACCAAATTCAAGATCT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||