These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8342#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1251 fasta sequence [TTTGGCCGAGGACAAACCCCATATATGTTCTGGCTTCAGTTACATCGAACTCTACATGTAGTGTAGATTACCGTGATGAAAATACCATTGGAATATCAAATTTGGACAGGCATTTACTTGGAAGAAAAAGTTTCAATCAGGAGTTTCGACAAACTACTGGAGTACGAGATCCTCGAAAACGTATCCATGCTCATGAGGGTAGTTGTCTCCTAGTGCGAACTAGAGATTATGGTCAGACGGATCCAATCTTAACTGCTTCTGCAGAAAGTCTAGTAAGAAAAAGCCAAAAACCAGGACATAAAAGGAATAGAACTCAGGAGACAAAGCTGACTGGAAATGCTCAGATGTATAAAAATCTTCGTATTGATACTTTAAAAGCCAGACTATCTAATGATTCGAGTGCAGATAATCAAAGTGAAAATTCCCTAGTTAGTGAAGGGTTAATAGCACCACTTGGACCAGCAGCTGCTGCCGCAATCGCCTCATCACTTTATGGATCTGGTGCTCCATATCTACATGCACAAGTACGAGCCCGGCAAGAATTAGCCTCCCTGGTCAGAATACCAGCACCCAAGCTGAATTCACGTGAAAAGCTATCCGAAATTGACTTCGCATTCGTACCAGAAGTAAGCGGTGATGAC-AACGA-T-AAAAATCACCGATTCAACAGAAATCCAAGTACCAATCGAATCAGACTAAAGTAGAGCATAAAGTTACAGGGAATTTCATGCTGAAACTCGAAAACTTAGAGGAAAAATCTCCAGATGAAAAGGATCAACTGCGGGATATTACCAAATCGCCAATAACAACATCGGTTGTCGTTGGTACAGCTAACATTTCAACTACTAAAACGGCAACAGAAGCAGAAGCTCCTA-GGGCGG-TGCAAGTGACTGGTGATAAAATTAGTCCAATGATTTCGAGGAAAATCTAAAATTAATTACGTCTGATTTACACTTATCTTTTTTGGCACAAGATTCACTAAAAATCCATAAATTTAAGCAAGACTCACGAATGTCACTTTGTTTTCTAACGCGAGCAAACTATCAAGAAGTGAACATTTAGTATTTTCTTTAACCTAATTAGAATTCTAAGCACTACTTCCGTTTTCTTTCTTTTTTGGATTTTCCAAGTTGACATTTTCATAAAAGTAATATTTAACCATTACTATCATATTCGCTTCCTTCTTGTATGTGATTAGAATTGAGAGAAATACACAGAATCTTAATGACGGTTCTTAAAAAAAAAAAAAAAAAA] [+] EMBL CD079631 [TTTGGCCGAGGACAAACCCCATATATGTTCTGGCTTCAGTTACATCGAACTCTACATGTAGTGTAGATTACCGTGATGAAAATACCATTGGAATATCAAATTTGGACAGGCATTTACTTGGAAGAAAAAGTTTCAATCAGGAGTTTCGACAAACTACTGGAGTACGAGATCCTCGAAAACGTATCCATGCTCATGAGGGTAGTTGTCTCCTAGTGCGAACTAGAGATTATGGTCAGACGGATCCAATCTTAACTGCTTCTGCAGAAAGTCTAGTAAGAAAAAGCCAAAAACCAGGACATAAAAGGAATAGAACTCAGGAGACAAAGCTGACTGGAAATGCTCAGATGTATAAAAATCTTCGTATTGATACTTTAAAAGCCAGACTATCTAATGATTCGAGTGCAGATAATCAAAGTGAAAATTCCCTAGTTAGTGAAGGGTTAATAGCACCACTTGGACCAGCAGCTGCTGCCGCAATCGCCTCATCACTTTATGGATCTGGTGCTCCATATCTACATGCACAAGTACGAGCCCGGCAAGAATTAGCCTCCCTGGTCAGAATACCAGCACCCAAGCTGAATTCACGTGAAAAGCTATCCGAAATTGACTTCGCATTCGTACCAGAAGTAAGCGGTGATGACAAACGA T AANAATCACCGATTC ACAGAAATCC AGTACCAATCG ATCAGAC ] [+] EMBL CD060915 [ TGCCAATAATCAAAGTGAAAATTCCCTAGTTAGTGAAGGGTTAATAGCACCACTTGGACCAGCAGCTGCTGCCGCAATCGCCTCATCACTTTATGGATCTGGTGCTCCATATCTACATGCACAAGTACGAGCCCGGCAAGAATTAGCCTCCCTGGTCAGAATACCAGCACCCAAGCTGAATTCACGTGAAAAGCTATCCGAAATTGACTTCGCATTCGTACCAGAAGTAAGCGGTGATGAC AACGA TAAAAAATCACCGATTCAACAGAAATCCAAGTACCAATCGAATCAGACTAAAGTAGAGCATAAAGTTACAGGGAATTTCATGCTGAAACTCGAAAACTTAGAGGAAAAATCTCCAGATGAAAAGGATCACCTGCGGGATATTACCAAATCGCCAATAACAACATCGGTTGTCGTTGGTACAGCTAACATTTCAACTACTAAAACGGCAACAGAAGCAGAAGCTCCTA GGGCGG TGCAAGTGACTGGTGATAAAAT ] [+] EMBL CD060853 [ GCAGATAATCAAAGTGAAAATTCCCTAGTTAGTGAAGGGTTAATAGCACCACTTGGACCAGCAGCTGCTGCCGCAATCGCCTCATCACTTTATGGATCTGGTGCTCCATATCTACATGCACAAGTACGAGCCCGGCAAGAATTAGCCTCCCTGGTCAGAATACCAGCACCCAAGCTGAATTCACGTGAAAAGCTATCCGAAATTGACTTCGCATTCGTACCAGAAGTAAGCGGTGATGAC AACGA TAAAAAATCACCGATTCAACAGAAATCCAAGTACCAATCGAATCAGACTAAAGTAGAGCATAAAGTTACAGGGAATTTCATGCTGAAACTCGAAAACTTAGAGGAAAAATCTCCAGATGAAAAGGATCAACTGCGGGATATTACCAAATCGCCAATAACAACATCGGTTGTCGTTGGTACAGCTAACATTTCAACTACTAAAACGGCAACAGAAGCAGAAGCTCCTA GGGCGG TGCACGTGACTGGTGATCAAAT ] [-] EMBL CD060855 [ CAGATAATCAAAGTGAAAATTCCCTAGTTAGTGAAGGGTTAATAGCACCACTTGGACCAGCAGCTGCTGCCGCAATCGCCTCATCACTTTATGGATCTGGTGCTCCATATCTACATGCACAAGTACGAGCCCGGCAAGAATTAGCCTCCCTGGTCAGAATACCAGCACCCAAGCTGAATTCACGTGAAAAGCTATCCGAAATTGACTTCGCATTCGTACCAGAAGTAATCGGTGATGAC AACGACA AAAAATCACCGATTCAACAGAAATCCAAGTACCAATCGAATCAGACTAAAGTAGAGCATAAAGTTACAGGGAATTTCATGCTGAAACTCGAAAACTTAGAGGAAAAATCTCCAGATGAAAAGGATCAACTGCGGGATATTACCAAATCGCCAATAACAACATCGGTTGTCGTTGGTACAGCTAACATTTCAACTACTAAAACGGCGACAGAAGCAGAAGCTCCTA GGTCGGCTGCAA TGACTGGTGATAAAATT ] [-] EMBL AI395599 [ caAATAACAACATCGGTTGTCGTTGGTACAGCTAACATTTCAACTACTAAAACGGCAACAGAAGCAGAAG TCCTA GGGCGG TGCAAGTGACTGGTGATAAAATTAGTCCAATGATTTCGAGGAAAATCTAAAATTAATTACGTCTGATTTACACTTATCTTTTTTGGCACAAGATTCACTAAAAATCCATAAATTTAAGCAAGACTCACGAATGTCACTTTGTTTTCTAACGCGAGCAAACTATCAAGAAGTGAACATTTAGTATTTTCTTTAACCTAATTAGAATTCTAAGCACTACTTCCGTTTTCTTTCTTTTTTGGATTTTCCAAGTTGACATTTTCATAAAAGTAATATTTAACCATTACTATCATATTCGCTTCCTTCTTGTATGTGATTAGAATTGAGAGAAATACACAGAATCTTAATGACGGTTCTTAAAAAAAAAAAAAAAAAA] [-] EMBL AI395314 [ CTAGGGGCGN TGCAAGTGACTGGTGATAAATTTAGTCCAATGATTTCGA GAAAATCTAAAGTTAATTACGTCTGATTTACACTTATCTTTTTTGGCACAAGATTCACTAAAAATCCATAAATTTAAGCAAGACTCACGAATGTCACTTTGTTTTCTAACGCGAGCAAACTATCAAGAAGTGAACATTTAGTATTTTCTTTAACCTAATTAGAATTCTAAGCACTACTTCCGTTTTCTTTCTTTTCTGGATTTTCCAAGTTGACATTTTCATAAAAGTAATATTTAACCATTACTATCATATTCGCTTCCTTCTTGTATGTGATTAGAATTGAGAGAAATACACAGAATCTTAATGACGATTCTAAAAAAAAAGTGAGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||