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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8349 cluster # 8349       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8349#0 length = 833 sequences # 6  

consensusID : consensus_8349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 833
fasta sequence
                              [CGCGCAACAAATGTTGCACGAGGATCCTTCTCATTTGATTCGTGACATGTAAGACATGTTCCTGGAGCTTGAAGTTGTGGATTGTATGCCAATGTACTGAAAAACAATTCATCCGGAATTTTCCCCAAATGTTCTTCTTCTTTAAGAATCTTTCTTATTTCTAGAGCTCGTTTATCATGGAGTATGTAATCAACCATTTCTCGCCTTAGAGCGGCATGGAAACTACCCTTCGTCCAGTTCACTACAAAACTCGGTTGTTTTGAAGGGATTCTTTCTTCAGGAGCATTTTTTCTAGCACATTCAATGATATTTGACTTATTCAACGCTTTCAGTGCAACTACTAACTCCCAATTCGTTCGTAATGGTAACTCTTTCCCGTTGATGTTGAGTAAATATTGCCAATTAACAGTTGGATTATTGAATAGCATTTCAGAACAAGCAAGAAAACCTTCCACTACTGAATAGTGTCCCCAAACTACACGGATGCTCTCAGATCGATTCACTACCAGTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCA-TGAAACCACTCAGGAGATTTCCTGTCCACA-TGAATACAATAAAGATTGTTGGGACGATAAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATAAATTAATAGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATTAGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGTGTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTA-TCTTT]

[+] EMBL CD162925             [CGCGCAACAAATGTTGCACGAGGATCCTTCTCATTTGATTCGTGACATGTAAGACATGTTCCTGGAGCTTGAAGTTGTGGATTGTATGCCAATGTACTGAAAAACAATTCATCCGGAATTTTCCCCAAATGTTCTTCTTCTTTAAGAATCTTTCTTATTTCTAGAGCTCGTTTATCATGGAGTATGTAATCAACCATTTCTCGCCTTAGAGCGGCATGGAAACTACCCTTCGTCCAGTTCACTACAAAACTCGGTTGTTTTGAAGGGATTCTTTCTTCAGGAGCATTTTTTCTAGCACATTCAATGATATTTGACTTATTCAACGCTTTCAGTGCAACTACTAACTCCCAATTCGTTCGTAATGGTAACTCTTTCCCGTTGATGTTGAGTAAATATTGCCAATTAACAGTTGGATTATTGAATAGCATTTCAGAACAAGCAAGAAAACCTTCCACTACTGAATAGTGTCCCCAAACTACACGGATGCTCTCAGATCGATTCACTACCAGTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCA TGAAACCACTCAGGAGATTTCCTGTCCACA TGAATANCATAAAG                                                                                                                                                                                                                                              ]
[+] EMBL CD162692             [CGCGCAACAAATGTTGCACGAGGATCCTTCTCATTTGATTCGTGACATGTAAGACATGTTCCTGGAGCTTGAAGTTGTGGATTGTATGCCAATGTACTGAAAAACAATTCATCCGGAATTTTCCCCAAATGTTCTTCTTCTTTAAGAATCTTTCTTATTTCTAGAGCTCGTTTATCATGGAGTATGTAATCAACCATTTCTCGCCTTAGAGCGGCATGGAAACTACCCTTCGTCCAGTTCACTACAAAACTCGGTTGTTTTGAAGGGATTCTTTCTTCAGGAGCATTTTTTCTAGCACATTCAATGATATTTGACTTATTCAACGCTTTCGGTGCAACTACTAACTCCCAATTCGTTCGTAATGGTAACTCTTTCCCGTTGATGTTGAGTAAATATTGCCAATTAACAGTTGGATTATTGAATAGCATTTCAGAACAAGCAAGAAAACCTTCCACTACTGAATAGTGTCCCCAAACTACACGGATGCTCTCAGATCGATCCACTACCAGTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCA TGAAACCACTCANGAGATTTCCTGTCCACA TGAAT                                                                                                                                                                                                                                                       ]
[-] EMBL CD157923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCATTGAAACCACTCAGGAGATTTCCTGTCCACATTGAATACAATAAAGATTGTTGGGACGATTAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATTAATTAATAGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATTAGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGTGTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTATTCTTT]
[-] EMBL CD158229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCA TGAAGCCACTCAGGAGATTTCCTGTCCACA TGAATACAATAAAGATTGTTGGGACGATAAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATAAATTAATAGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATTAGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGTGTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTA TCTTT]
[-] EMBL CD158306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTACATTAACACCGAAACATCGAGACAGTTTCACAATTTCCTCA TGAAACCACTCAGGAGATTTCCTGTCCACA TGAATACAATAAAGATTGTTGGGACGATAAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATAAATTAATAGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATTAGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGTGTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTA TCTTT]
[-] EMBL CD158033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATCNTTGGGACGATAAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATAAATTAATAGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATTAGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGTGTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTA TCTTT]


>consensus_8349#0 CGCGCAACAAATGTTGCACGAGGATCCTTCTCATTTGATTCGTGACATGTAAGACATGTT CCTGGAGCTTGAAGTTGTGGATTGTATGCCAATGTACTGAAAAACAATTCATCCGGAATT TTCCCCAAATGTTCTTCTTCTTTAAGAATCTTTCTTATTTCTAGAGCTCGTTTATCATGG AGTATGTAATCAACCATTTCTCGCCTTAGAGCGGCATGGAAACTACCCTTCGTCCAGTTC ACTACAAAACTCGGTTGTTTTGAAGGGATTCTTTCTTCAGGAGCATTTTTTCTAGCACAT TCAATGATATTTGACTTATTCAACGCTTTCAGTGCAACTACTAACTCCCAATTCGTTCGT AATGGTAACTCTTTCCCGTTGATGTTGAGTAAATATTGCCAATTAACAGTTGGATTATTG AATAGCATTTCAGAACAAGCAAGAAAACCTTCCACTACTGAATAGTGTCCCCAAACTACA CGGATGCTCTCAGATCGATTCACTACCAGTACATTAACACCGAAACATCGAGACAGTTTC ACAATTTCCTCATGAAACCACTCAGGAGATTTCCTGTCCACATGAATACAATAAAGATTG TTGGGACGATAAATTAAACGCAGTAGTCGAGCTGTCCATTCAATATCATCATAAATTAAT AGGGAATATGCAATCGGATATGATTTCTCTTCTTCACTCAACCAGACAGGTTGTTCAATT AGTTGTTTAAAGTTATCACAAGATTTCGAACCATTCCATAGACGATAACGGTCGTTGCGT GTTGAATAAGTTTCGAAGTGTTTGGCAGTTGACAGGCTTGTCACTGTATCTTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)