cluster # 8398

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Schistosoma mansoni
cluster # 8398 cluster # 8398 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8398#0 length = 429 sequences # 6

consensusID : consensus_8398#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 429
fasta sequence

                              [TGGG-AAGATTCAAGCAAACAATACTAAGTGAATTGAAATGTGATACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCATTATATTACTTTACTTATCTATTTTTGTCAGTATACTCTAGAAAGTGTTGTAGTTGTAAAGAAATCAAATTTCGCTGAAGCACAAAACGTCTGTGAAAATTATTTTATTTTGTTTGTCATTAACAAATCCTAATGACTGGTGCGAAGTGTCAATAGATGTTTATGCATAATTAAAACAAACTGATTCATTGCAAATAGTTTCCTTAGTTTTAATATGAACTAGGATCAATTTATAAAAATTTCTATATTTTTTTCCAGTCATTGTTCAATAAAAGAAAACTAGGATTATTGTGGTAAAAATAATTTAGCC]

[+] EMBL CD087837             [TGGGAAAGACTCAAGCAAACAATACTAAGTGAATTGAAATGTGATACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCATTATATTACTTTACTTATCTGTTTTTGTCAGTATACTCTAGAGAGTGTTGTAGTTGTAAAGAAATCAAATTTCGCTGAAGCACAAAACGTCTGTGAAAATTATTTCATTTTGTTTGTCATTAACAAATCCTAATGACTGGTGCGAAGTGTCAATAGATGTTTATGCATAATTAAAACAAACTGATTCATTGCAAATAGTTTCCTTAGTTTTAATATGAACTAGGATCAATTTATAAAAATTTCTATATTTTTTTCCAGTCATTGTTCAATAAAAGAAAACTAGGATTATTGTGGTAAAAATAATTTAGC ]
[+] EMBL CD087918             [TGGG AAGATTCAAACAAACAATACTAAGTGAATTGAAATGTGATACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCATTATATTACTTTACTTATCTA                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD087885             [TGGG AAGATTCAAACAAACAATACTAAGTGAATTGAAATGTGATACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATC TTTTATAGGTATAACAGCATTATATTACT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD087975             [            tAGCTGACTATTGTGAGAGAATTGAAATGTGATACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCATTATATTACTTTACTTATCTATTTTTGTCAGTATACTCTAGAAAGTGTTGTAGTTGTAAAGAAATCAAATTTCGCTGAAGCACAAAACGTCTGTGAAAATTATTTTATTTTGTNTGTCATTAACAAATCCTAAT                                                                                                                                                                                ]
[+] EMBL CD087953             [                                             ACAACTAGAAGAATAATTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCATTATATTACTTTACTTATCTATTTTTGTCAGTATACTCTAGAAAGTGTTGTAGTTGTAAAGAAATCAAATTTCGCTGAAGCACAAAACGTCTGTGAAATTTATTTTATTTTG                                                                                                                                                                                                      ]
[-] EMBL CD087872             [                                                                                                                                                                                                                                                                                                               ATTCATTGCAAATAGTTTCCTTAGTTTTAATATGAACTAGGATCAATTTAT AAAATTTCTATA TTTTTTCCAGTCATTGTTCAATAAAAGAAAACTAGGATTATTGTGGTAAAAATAATTTAGCC]




>consensus_8398#0
TGGGAAGATTCAAGCAAACAATACTAAGTGAATTGAAATGTGATACAACTAGAAGAATAA
TTTTTGTATCAGCATTTTTTAGATGCTTCTCTTGGTATCTTTTTATAGGTATAACAGCAT
TATATTACTTTACTTATCTATTTTTGTCAGTATACTCTAGAAAGTGTTGTAGTTGTAAAG
AAATCAAATTTCGCTGAAGCACAAAACGTCTGTGAAAATTATTTTATTTTGTTTGTCATT
AACAAATCCTAATGACTGGTGCGAAGTGTCAATAGATGTTTATGCATAATTAAAACAAAC
TGATTCATTGCAAATAGTTTCCTTAGTTTTAATATGAACTAGGATCAATTTATAAAAATT
TCTATATTTTTTTCCAGTCATTGTTCAATAAAAGAAAACTAGGATTATTGTGGTAAAAAT
AATTTAGCC

clustalw multiple alignements is not computed in this case