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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8400 cluster # 8400       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8400#0 length = 1005 sequences # 6  

consensusID : consensus_8400#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1005
fasta sequence
                              [GTCCACAGACATCTTTAAAGCGATCTGAGATTTGTCATAACAATTTAGATACATCTACTGCATTACCCGCTAGTCAAGCAAGTCGACGTCAAAGACGTTCTGAAAGTAAAACAATATCAAACACTGTTCCTGTGTTAAAAGATAACACTGTGTTTTCATTTGCAACACCTGCAGTTTTAACATCTTCAACTGTAGTTAATCCGACTTTAATTCCCGTTTCTTGTGCTCCATCAACTCTATCTACTAAATCAACGGAAGCCATTATTCCAAGTCATTCTGTGATAACGACAAGTTGTTCCCAAGTTGCGCACAGTGGTGCAGCGTCATCTTCGGCTGATTGTGTACAGAAAATGAAAAGCTGTAATATTCACACATCTATTGATCCTTATGAAC-CGAATTT-CGATGA-AGAAT-CACCAGT-TGGTTTCAAT-CCAT-CTCAGT-TACATCAT-CATCGAT-CATCTC-CATCATTA-TGTCCATCT-CCTAATTCTATTCACCAAACTCG-TAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAAATTCTCAATCTCTTCCTTCTACAACTGTTGTAGTTGCCTCGTCATCTTCACCAATTAACTCATCTCCAGGACTTGTAATATTAGATACAAAATCTATCAGAAATCCTGAGATAATTTCATGCATCACTACTGCTTCATCATCTGCACCTGAATCTTCTGTGTTGAATGTGCCACCGGCCACTTTCTGTGTTACTTCTAGCCAGTCTGTTGATACAGTAGACGAAGTGATTAGTGATGTATGTGCTGGTCATTTTGATGTTCAAAGTTATCTCAAAAATTGGTCATGTAATACTGTTAGTAGTCCTGTTACTACTACGGTCGGAACAACTATTAGTACGAGCAA-ATTCAGTCATCT-AAAGTTCCGTGAGCCGTCCGTTACCACATGAATCTATATCATTACCTAGTATTTTAGCCAATATCCCAGCTTGTACTCCAGACCATTACTATTACTACTGCTACTATTAC]

[+] EMBL CD114328             [GTCCACAGACATCTTTAAAGCGATCTGAGATTTGTCATAACAATTTAGATACATCTACTGCATTACCCGCTAGTCAAGCAAGTCGACGTCAAAGACGTTCTGAAAGTAAAACAATATCAAACACTGTTCCTGTGTTAAAAGATAACACTGTGTTTTCATTTGCAACACCTGCAGTTTTAACATCTTCAACTGTAGTTAATCCGACTTTAATTCCCGTTTCTTGTGCTCCATCAACTCTATCTACTAAATCAACGGAAGCCATTATTCCAAGTCATTCTGTGATAACGACAAGTTGTTCCCAAGTTGCGCACAGTGGTGCAGCGTCATCTTCGGCTGATTGTGTACAGAAAATGAAAAGCTGTAATATTCACACATCTATTGATCCTTATGAAC CGAATTT CGATGA AGAAT CACCAGT TGGTTTCAAT CCAT CTCAGT TACATCAT CATCGAT CATCTC CATCATTA TGTCCATCT CCTAATTCTATTCACCAAACTCG TAAAACGCCTTGTACTACGGCTGANAACATGACTACCACAAATTCTCAATCTCTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD091444             [                                                                                                                                                                                                                                                 TACTAAATCAACGGAAGCCATTATTCCAAGTCATTCTGTGATAACGACAAGTTGTTCCCAAGTTGCGCACAGTGGTGCAGCGTCATCTTCGGCTGATTGTGTACAGAAAATGAAAAGCTGTAATATTCACACATCTATTGATCCTTATGAAC CGAATTT CGATGA AGAAT CACCAGT TGGTTTCAAT CCAT CTCAGT TACATCAT CATCGAT CATCTC CATCATTA TGTCCATCT CCTAATTCTATTCACCAAACTCG TAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD061402             [                                                                                                                                                                                                                                                                                                                               AGCGTCATCTTCGGCTGATTGTGTACAGAAAATGAAAAGCTGTAATGTTCACACATCTATTGATCCTTATGAACGCGAATTTNCGATGATAGAATACACCAGTATGGTTTCAATACCATACTCAGTGTACATCATACATCGATACATCTCNCATCATTAGTGTCCATCTACCTAATTCTATTCACCAAACTCGATAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAAATTCTCAATCTCTTCCTTCTACAACTGTTGTAGTTGCCTCGCCATCTTCACCAATTAACTCATCTCCAGGACTTGTAATATTAGATACAAAATCTATCAGAAATCCTGAGATAATTTCATGCATCACTACTG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD122097             [                                                                                                                                                                                                                                                                                                                                                                   AAGCTGCAATATTCACACATGTGTTGATCCTTATGAAC CGATTTT CGATGA ATAAT CACCAGT TGGTTTCAAT CCAT CTCAGT TACATCAT CATCGAT CATCTC CATCATTA TGTCCATCT CCTAATTCTATTCACCAAACTCG TAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAAATTCTCAATCCCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD167207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATTCACCAAACTCG TAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAAATTCTCAATCTCTTCCTTCTACAACTGTTGTAGTTGCCTCGTCATCTTCACCAATTAACTCATCTCCAGGACTTGTAATATTAGATACAAAATCTATCAGAAATCCTGAGATAATTTCATGCATCACTACTGCTTCATCATCTGCACCTGAATCTTCTGTGTTGAATGTGCCACCGGCCACTTTCTGTGTTACTTCTAGCCAGTCTGTTGATACAGTAGACGAAGTGATTAGTGATGTATGTGCTGGTCATTTTGATGTTCAAAGTTATCTCAAAAATTGGTCATGTAATACTGTTAGTAGTCCTGTTACTACTACGGTCGGAACAACTATTAGTACGAGCAA ATTCAGTCATCT AAAGTTCCGTGAGCCGT                                                                                             ]
[-] EMBL CD114104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGATGCCTCGTCATCTTCACCAATTAACTCATCTCCAGGACTTGTAATATTAGATACAAAATCTATCAGAAATCCTGAGATAATTTCATGCATCACTACTGCTTCATTATCTGCACATGAATCTTCTGTGTTGAATGTGCCACCGGCCACTTTCTGTGTTACTTCTAGCCAGTCTGTTGATACAGTAGACGAAGTGATTAGTGATGTATGTGCTGGTCATTTTGATGTTCAAAGTTATCTCAAAAATTGGTCATGTAATACTGTTAGTAGTCCTGTTACTACTACGGTCGGAACAACTATTAGTACGAGCAATATTCAGTCATCTAAAATTTCCGTCAACAATCCGTTACCACATGAATCTATATCATTACCTAGTATTTTAGCCAATATCCCAGCTTGTACTCCAGACCATTACTATTACTACTGCTACTATTAC]


>consensus_8400#0 GTCCACAGACATCTTTAAAGCGATCTGAGATTTGTCATAACAATTTAGATACATCTACTG CATTACCCGCTAGTCAAGCAAGTCGACGTCAAAGACGTTCTGAAAGTAAAACAATATCAA ACACTGTTCCTGTGTTAAAAGATAACACTGTGTTTTCATTTGCAACACCTGCAGTTTTAA CATCTTCAACTGTAGTTAATCCGACTTTAATTCCCGTTTCTTGTGCTCCATCAACTCTAT CTACTAAATCAACGGAAGCCATTATTCCAAGTCATTCTGTGATAACGACAAGTTGTTCCC AAGTTGCGCACAGTGGTGCAGCGTCATCTTCGGCTGATTGTGTACAGAAAATGAAAAGCT GTAATATTCACACATCTATTGATCCTTATGAACCGAATTTCGATGAAGAATCACCAGTTG GTTTCAATCCATCTCAGTTACATCATCATCGATCATCTCCATCATTATGTCCATCTCCTA ATTCTATTCACCAAACTCGTAAAACGCCTTGTACTACGGCTGAAAACATGACTACCACAA ATTCTCAATCTCTTCCTTCTACAACTGTTGTAGTTGCCTCGTCATCTTCACCAATTAACT CATCTCCAGGACTTGTAATATTAGATACAAAATCTATCAGAAATCCTGAGATAATTTCAT GCATCACTACTGCTTCATCATCTGCACCTGAATCTTCTGTGTTGAATGTGCCACCGGCCA CTTTCTGTGTTACTTCTAGCCAGTCTGTTGATACAGTAGACGAAGTGATTAGTGATGTAT GTGCTGGTCATTTTGATGTTCAAAGTTATCTCAAAAATTGGTCATGTAATACTGTTAGTA GTCCTGTTACTACTACGGTCGGAACAACTATTAGTACGAGCAAATTCAGTCATCTAAAGT TCCGTGAGCCGTCCGTTACCACATGAATCTATATCATTACCTAGTATTTTAGCCAATATC CCAGCTTGTACTCCAGACCATTACTATTACTACTGCTACTATTAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)