These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8415#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 513 fasta sequence [CAACAATCACAACAGCCAATGCAATCAGAGTTTTCACTTCGTCATCAATCACAAGCACAACAATCTTTGCAAGGGTCATCA-TTACAACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTTTGCAAAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAATTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATT-AAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTACA-AGA-TGATGA-TTA-TGAA-GA-TGA-AGA-GA-TGACA-GAAGA-TGA-TATTTTTAAA-TTACATGAAGAA-TTAGAAAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAA-TTGAAGCTCGTACTATCATTGATCAACAACAAAATCAATTAACAGAATTTCGACGTTATGCTGCACAATATCAAACTGATGCTGAAGCATTTAAAATGAAAAGTATGTTTTTATTAAATAATACA] [+] EMBL CD196175 [CAACAATCACAACAGCCAATGCAATCAGAGTTTTCACTTCGTCATCAATCACAAGCACAACAATCTTTGCAAGGGTCATCA TTACAACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTTTGCAAAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAATTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATT AAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTGCA AGA TGATGA TTA TGAA GA TGA AGA GA TGACA GAAGA TGA TATTTTTAAA TTACATGAAGAATTTAG AAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAA TTGAAGCTCGTACTATCATTG ] [+] EMBL CD196248 [ aacgGAGTGTTTACTTCGTCATCAATCACAAGCACAACAATCTTTGCAAGGGTCATCA TTACAACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTTTGCAAAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAATTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATT AAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTACA AGA TGATGA TTA TGAA GA TGA AGA GA TGACA GAAGA TGA TATTTTTAAA TTACATGAAGAA TTAGAAAATAC ] [+] EMBL CD201223 [ GTCATCATTTACAACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTTTGCAAAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAGTTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATT AAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTACA AGA TGATGA TTA TGAA GA TGA AGA GA TGACA GAAGA TGA TATTTTTAAATTTAC TGAAGAA TTAGAAAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAATTTGAAGCT ] [+] EMBL CD064278 [ TACAACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTCTGC AAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAATTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATT AAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTACACAGACTGATGACTTACTGAACGACTGACAGACGACTGACACGAAGACTGACTATTTTTAAA TTACATGAAGAA TTAGAAAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAA TTGAAGCTCGTACTATCATTAATCAACAACAAAATCAATTAACAGAATTTCGACGTTATGCTGCACAATATC ] [+] EMBL CD064183 [ AACCATCAGTAGAGCAGCAGTCAGCATTAGTGTCTTTGCAAAACACTCAACAACAACAGCAACAACAACAACAACAACTGAATGATCAACCATTCAATCGAAAATTTCGTCAATCTTGGCGTAAAACACCAGATAATTTACCGACTAGACAATTAAAAAAAAGCAACTAAATTACTAGAGAATGATTTTAGTTTACA AGA TGATGA TTA TGAA GA TGA AGA GA TGACA GAAGA TGA TATTTTTAAA TTACATGAAGAA TTAGAAAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAA TTGAAGCTCGTACTATCATTGATCAACAACAAAATCAATTAACAGAATTTCGACGTTATGCTGCACAATATCAAACTGATGCTGAAGCATTTAAAATGAAAAGTATGTTTTTATTAAATAATACA] [-] EMBL CD196134 [ AGACAATT AAAAAAAGCAACTAAATTACTAGAGAATGATTNTAGTTNACA AGA TGATGA TTA TGAA GA TGA AGA GA TGACA GAAGA TGA TATTTTTAAA TTACATGAAGAA TTAGAAAATACACGAGTACAAAATAATGAAATGAAAACAGCATTAA TTGAAGCTCGTACTATCATTGATCAACAACAAAATCAATTAACAGAATTTCGACGTTATGCTGCACAATATCAAACTGATGCTGAAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||