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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8423#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 655 fasta sequence
[ATCTAAACAATCAAAAGAACTTGAACATTCATCTGAAATTGAATGGGCTACTAGTATTGGAGATATAGAAGGTTTAAAACAAGCAAAACTACGCGAAACATTAGAAAATGAAATGAAACAACAACTTCCTGGACGTTTAACCGCTGCAGATGCTGTAGGAAGTCATATTGCTCGTAAAACTGAACGTCGAAATATACGTATGGAAGCCGCTTCTTTAGCACAGAAAACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTAGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAAATGTTGTTTCTTTGCAA--ATTACACATTTTCAAGATAATACTCAATCTATTGAAAATTCAATAGATCCAGATAAAGTAG-ACTTGGCTATTAGTCTTCAAATAGGGAAATTACATTCTATCTTCTTATATCATTTTATTACACGTGTATTGAATTTTATGGAAGCCTATCAAGAAGGC]
[-] EMBL CD155985 [ATCTAAACAATCAAAAGAACTTGAACATTCATCTGAAATTGAATGGGCTACTAGTATTGGAGATATAGAAGGTTTAAAACAAGCAAAACTACGCGAAACATTAGAAAATGAAATGAAACAACAACTTCCTGGACGTTTAACCGCTGCAGATGCTGTAGGAAGTCATATTGCTCGTAAAACTGAACGTCGAAATATACGTATGGAAGCCGCTTCTTTAGCACAGAAAACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACA ]
[+] EMBL CD165506 [ AAAACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTAGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAAATGTTGTTTCTTTGCAA ATTACACATTTTCAAGATAATACTCAATCTATTGAAA ]
[+] EMBL CD130656 [ AAACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTAGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAATTGTTGTTTCTTTGCAA ATTACACATTTTCAAGATAATACTCAATCTATTGAAAATTCAATAGATCCAGATAAAGTAGAACTTGGCTATTAGTCTTCAAATAGGAAAATTACATTCTATCTTCTTATATCATTTTATTACACGTGTATTGAATTNTATG ]
[+] EMBL CD165493 [ AAACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTAGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAAATGTTGTTTCTTTGCAA ATTACACATTTTCAAGATAATACTCAATCTATTGAAAATTCAATAGATCCAGATAAAGTAG ACTTGGCTATTAGTCTTCAAATAGGGAAATTACATTCTATCTTCTTATATCATTTTATTACACGTGTATTGAATTTTATG ]
[-] EMBL CD190352 [ AACAGGCAAAGTTGCAGTTATTCCTGAATTGAATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTGGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAAATGTTGTTTCTTTGCAA ATTACACATTTTCAAGATAATACTCAATCTATTGAAAATTCAATAGATCCAGATAAAGTAG ACTTGGCTATTAGTCTTCAAATAGGGAAATTACATTCTATCTTCTTATATCATTTTATTACACGTGTATTGAATTTTATGG ]
[-] EMBL CD130591 [ ATATTACACAGTGGATGGTGAATGCAACATTGGATAAAGTGAATGTTACATTGGGCTCTAAAGAAACTGATTTATTTTCAACTACCGTTAACGGTCTTCGAATTGATGTTCGTACAACATATGATACTGTAGAGATTTCGGCAATACTTTCTGAATTCATTGTAATTGATCATATTGTGAATACATCTTATCGTAAGATTTTATGGGTTGATCCAACAGAAAATGTTGTTTCTTTGCAAATATTACACATTTTCAAGATAATACTCAATCTATTGAAAATTCAATAGATCCAGATAAAGTAG ACTTGGCTATTAGTCTTCAAATAGGGAAATTACATTCTATCTTCTTATATCATTTTATTACACGTGTATTGAATTTTATGGAAGCCTATCAAGAAGGC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||