These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8428#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1011 fasta sequence [ATACGAGAAAAACTACAGTCTGAAGTACAGGCATTCGAAGAAGAAAATGAAACACTATGTAAGCGTGCTTCAGATGCTCAGTTAGCTATCAGATTGTTGGAGTCAGAGCATAGTGAGTTGTTATCTGAGATAGCTCGATTACGTGGAGAATTGGCTTCACATCGTGAGTATGACAATCGCACTGCATTAAATGATGTACATGATTTACTGCATAAAAATGAATCTAGAAGCTTAGAAAACGGCGTAAAAAATCACAATATCTCCATATCATCGTCTTCTTCGTCATCATCAACAAATCTAGTCAATGGAACACAACATTCACATATTAACAACCATTCATCAGATTCTGATCTACGGGAACGCTTGTATGAAAGTGAAACCAAGCTAAAACGAGTCATGGAAAACCTAATAGCAGTGAGACATGAAGCACAAAGTTTTAAATTAGGCTGGGAGTCAGAACAAAAAGAATGGATGAAAGAACGCGAGTTGTTAGAAGAGAAGATTAAGATATCCGTTGATCAAAAG-ACTGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTTGAAAATAATATAGGTAATTGGGAACGCCATCTATTCGAGTTAAATCAGTGGGTTGATGATGAACGTGAAGCTAAAGAAAAACTGCATAATTTCACAATGCGTTTAGTGTCTGAATTGGATACACTTCGTGCTTCAGGTTTGGTACAAGATTATAATCAGAATGGTGTGTGTCCGAATGGTTATCAATCATCATGGCGTGCAAACGATTTGAATTCCTTAGCCTATGATAGTCCTGCACAAAGTGTTATTGTTGATAGTACATTGGACTGGCGTCACGTAAATCTACTAAGTTAAATAAAATGGAAAGATGGAGTCATGAGGTAGCTTTAAACAATGAGGTAAAAGCAAGGGAACAAGCAGAACTCCTTTTGCAAGAAGTTGAGGGCTCGTTTGAAGAAATGTATGATCAAATTAATCAAAAAGATTTGAAGA] [+] EMBL CD195511 [ATACGAGAAAAACTACAGTCTGAAGTACAGGCATTCGAAGAAGAAAATGAAACACTATGTAAGCGTGCTTCAGATGCTCAGTTAGCTATCAGATTGTTGGAGTCAGAGCATAGTGAGTTGTTATCTGAGATAGCTCGATTACGTGGAGAATTGGCTTCACATCGTGAGTATGACAATCGCACTGCATTAAATGATGTACATGATTTACTGCATAAAAATGAATCTAGAAGCTTAGAAAACGGCGTAAAAAATCACAATATCTCCATATCATCGTCTTCTTCGTCATCATCAACAAATCTAGTCAATGGAACACAACATTCACATATTAACAACCATTCATCAGATTCTGATCTACGGGAACGCTTGTATGAAAGTGAAACCAAGCTAAAACGAGTCATGGAAAACCTAATAGCAGTGAGACATGAAGCACAAAGTTTTAAATTAGGCTGGGAGTCAGAA ] [-] EMBL CD116511 [ TGGAGAATTGGCTTCACATCGTGAGTATGACAATCGCACTGCATTAAATGATGTACATGATTTACTGCATAAAAATGAATCTAGAAGCTTAGAAAACGGCGTAAAAAATCACAATATCTCCATATCATCGTCTTCTTCGTCATCATCAACAAATCTAGTCAATGGAACACAACATTCACATATTAACAACCATTCATCAGATTCTGATCTACGAGAACGCTTGTATGAAAGTGAAACCAAGCTAAAACGAGTCATGGAAAACCTAATAGCAGTGAGACATGAAGCACAAAGTTTTAAATTAGGCTGGGAGTCAGAACAAAAAGAATGGATGAAAGAACGCGAGTTGTTAGAAGAGAAGATTAAGATATCCGTTGGTCAAAAG ACTGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTTGAAAATA ] [+] EMBL CD157493 [ ATGAAAGAACGCGAGTTGTTAGAAGAGAAGATTAAGATATCCGTTGATCAAAAG ACCGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTCGAAAATAATATAGGTAATTGGGAACGCCATCTATTCGAGTTAAATCAGTGGGTTGATGATGAACGTGAAGCTAAAGAAAAACTGCATAATTTCACAATGCGTTTAGTGTCTGAATTGGATACACTTCGTGC ] [+] EMBL CD187650 [ ACGCGAGTTGTTAGAAGAGAAGATTAAGATATCCGTTGATCAAAAG ACTGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTTGAAAATAATATAGGTAATTGGGAACGCCATCTATTCGAGTTACATCAGTGGGTTGATGATGAACGTGAAGCTAAAGAAAAACTGCATAATTTCGCAATGCGTTTAGTGTCTGGATTGGATACACTTCGTGCTTCAGGTTTGGTGCAAGATTATAATCAGAATGGTGTGTGTCCGAATGGTTATCAATCATCATGGCGTGCAAACGATGTGAATTCCTTAGCCTATGATAGTCCTGCACAAAGTGTTATTGTTGATAGTACAT ] [+] EMBL CD091624 [ CGCGAGTTGTCAGAAGAGAAGATCAAGATATCCGTTGATCAAAAGCACTGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTTGACATTATTATAGGTAATTGGGAACGCCATCTATTCGAGTTAAATCAGTGGGTTGATGATGAACGTGAAGCTAAAGAAAAACTGCATAATTTCACAATGCGTTTAGTGTCTGAATTGGATACACTTCGTGCTTCAGGTTTGGTACAAGATTATAATCAGAATGGTGTGTGTCCGAATGGTTATCAATCATCATGGCGTGCAAACGATTTGAATTCCTTAGCCTATGATAGTCCTGCACAAAGTGTTATTGTTGATAGTACATTGGACTGGCGTCACGTAAATCTACTAAGTTAAATAAAATGGAAAGATGGAGTCATGAGGTAGCTTTAAACAATGAGGTAAAAGCAAGGGAACAAGCAGAACTCCTTTTGCAAGAAGTTGAGGGCTCGTTTGAAGAAATGTATGATCAAATTAATCAAAAAGATTTGAAGA] [+] EMBL CD091642 [ CGCGAGTTGTTAGAAGAGAAGATTAAGATATCCGTTGATCAAAAG ACTGTCGCGTTAGAAAATGAGTTGACCACACTTAAAGAGAATAACGCTGAACTTGAAAATAATATAGGTAATTGGGAACGCCATCTATTCGAGTTAAATCAGTGGGTTGATGATGAACGTGAAGCTAAAGAAAAACTGCATAATTTCACAATGCGTTTAGTGTCTGAATTGGATACACTTCGTGCTTCAGGTTTGGTACAAGATTATAATCAGAATGGTGTGTGTCCGAATGGTTATCAATCATCATGGCGTGCAAACGATTTGAATTCCTTAGCCTATGATAGTCCTGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||