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Schistosoma mansoni
cluster # 8462 cluster # 8462       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8462#0 length = 1240 sequences # 7  

consensusID : consensus_8462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1240
fasta sequence
                              [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATAAGGGATATATATTTGCAAGGATAAATCTTATCAAGCTGAAAAAATAAACATTTTACTTTATAATTTTAATGTTAGAATTCGGTCGGTGTGCCATTTTGGTTACTTTGGCCATGGCCATTTGCCGCTCATCTACTTTTCCCTTTTTTGGGGGACTAAGGTGTTTTGATCTTATCCTTATTAACTTTAGACGATGTCGCCGACGGTCAACAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTTTGGAGCTAGAAGATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTACAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA-TGTTCTTCAAGCAAGGTATTCTCA-TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA-CGGCTTTACATC-TAACATTTTACGTTCCAATG-CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTTGCTTTCACCATCTTCACTAAGCGAAGTGAATGGAAGAATATCTAAATTTTTCGTCAACGACAAGGTTGAACTTCTGGAAGGTAAATGAATGCTTCATTTGAAAAGTGTTGCGTCACACTAGATTTACGGAATCAATTAAAACCTTGCATCACTTGGGTTAACAAGGAACTATTAGAAGATACATTCGGTTTACTTGGTTTGCTGGTTCTTGTTCACAATTAGAGAATGATGACCATGTGAAAATCGGAAGTGATAAACAATATTGTACCAAAGCTATACATAATTTCTCAGTAACTAACCAAAATATGTTGTTAGATATTCGTCTTCATCCAGTTAATA]

[+] EMBL AI976317             [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATAAGGGATATATATTTGCAAGGATAAATCTTATCAAGCTGAAAAAATAAACATTTTACTTTATAATTTTAATGTTAGAATTCGGTCGGTGTGCCATTTTGGTTACTTTGGCCATGGCCATTTGCCGCTCATCTACTTTTCCCTTTTTTGGGGGACTAAGGTGTTTTGATCTTATCCTTATTAACTTTAGACGATGTCGCCGACGGTCAACAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTTTGGAGCTAGAAGATTGGCTGTTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD114059             [                                                                                                                                                                                                                          TAAGTTGTTTTGATCTTATCCTCATTAACTTTCGACGATGTCGCCGACGGTCAGCAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTCTGGAGCTAGAAGATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTACAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGCAGTGGAATTTCTTTAGAAGGTCCTTTAGCTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCCACTTCACCTTGTAAATACCACCGGC TTACATCTTAACA TTTACGTTTCAATGCCTTCCGTTTCTTTATCAA                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD189247             [                                                                                                                                                                                                                                                                                                                                                      ATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTCCAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTNTACGTTCCAATG CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTTGC                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD159070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTCTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCAACATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD158296             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATC                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD157996             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCGTGGCGTTGTACGTCAAAATTGTTCTTCAAGCAAGGTATTCTCATTTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATCAAGCa                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD128391             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTCGCTTTCACCATCTTCACTAAGCGAAGTGAATGGAAGAATATCTAAATTTTTCGTCAACGACAAGGTTGAACTTCTGGAAGGTAAATGAATGCTTCATTTGAAAAGTGTTGCGTCACACTAGATTTACGGAATCAATTAAAACCTTGCATCACTTGGGTTAACAAGGAACTATTAGAAGATACATTCGGTTTACTTGGTTTGCTGGTTCTTGTTCACAATTAGAGAATGATGACCATGTGAAAATCGGAAGTGATAAACAATATTGTACCAAAGCTATACATAATTTCTCAGTAACTAACCAAAATATGTTGTTAGATATTCGTCTTCATCCAGTTAATA]


>consensus_8462#0 TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTA AGATAAGGGATATATATTTGCAAGGATAAATCTTATCAAGCTGAAAAAATAAACATTTTA CTTTATAATTTTAATGTTAGAATTCGGTCGGTGTGCCATTTTGGTTACTTTGGCCATGGC CATTTGCCGCTCATCTACTTTTCCCTTTTTTGGGGGACTAAGGTGTTTTGATCTTATCCT TATTAACTTTAGACGATGTCGCCGACGGTCAACAAGAGTGCGCTCATTTTTACCAATAAG TATTTCACCTCTTGGTGGACAAATCTCTTTTGGAGCTAGAAGATTGGCTGCTGAGACGAC TGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGG TATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTA CAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTG ATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGTAG TGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACAT TCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGG CTTGAAAAGACCGTGGCGTTGTACGTCAAAATGTTCTTCAAGCAAGGTATTCTCATTTCG TTTAGTAGCTGCAACTTCACCTTGTAAATACCACGGCTTTACATCTAACATTTTACGTTC CAATGCATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTT TGCTTTCACCATCTTCACTAAGCGAAGTGAATGGAAGAATATCTAAATTTTTCGTCAACG ACAAGGTTGAACTTCTGGAAGGTAAATGAATGCTTCATTTGAAAAGTGTTGCGTCACACT AGATTTACGGAATCAATTAAAACCTTGCATCACTTGGGTTAACAAGGAACTATTAGAAGA TACATTCGGTTTACTTGGTTTGCTGGTTCTTGTTCACAATTAGAGAATGATGACCATGTG AAAATCGGAAGTGATAAACAATATTGTACCAAAGCTATACATAATTTCTCAGTAACTAAC CAAAATATGTTGTTAGATATTCGTCTTCATCCAGTTAATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)