These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8462#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1240 fasta sequence [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATAAGGGATATATATTTGCAAGGATAAATCTTATCAAGCTGAAAAAATAAACATTTTACTTTATAATTTTAATGTTAGAATTCGGTCGGTGTGCCATTTTGGTTACTTTGGCCATGGCCATTTGCCGCTCATCTACTTTTCCCTTTTTTGGGGGACTAAGGTGTTTTGATCTTATCCTTATTAACTTTAGACGATGTCGCCGACGGTCAACAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTTTGGAGCTAGAAGATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTACAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA-TGTTCTTCAAGCAAGGTATTCTCA-TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA-CGGCTTTACATC-TAACATTTTACGTTCCAATG-CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTTGCTTTCACCATCTTCACTAAGCGAAGTGAATGGAAGAATATCTAAATTTTTCGTCAACGACAAGGTTGAACTTCTGGAAGGTAAATGAATGCTTCATTTGAAAAGTGTTGCGTCACACTAGATTTACGGAATCAATTAAAACCTTGCATCACTTGGGTTAACAAGGAACTATTAGAAGATACATTCGGTTTACTTGGTTTGCTGGTTCTTGTTCACAATTAGAGAATGATGACCATGTGAAAATCGGAAGTGATAAACAATATTGTACCAAAGCTATACATAATTTCTCAGTAACTAACCAAAATATGTTGTTAGATATTCGTCTTCATCCAGTTAATA] [+] EMBL AI976317 [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATAAGGGATATATATTTGCAAGGATAAATCTTATCAAGCTGAAAAAATAAACATTTTACTTTATAATTTTAATGTTAGAATTCGGTCGGTGTGCCATTTTGGTTACTTTGGCCATGGCCATTTGCCGCTCATCTACTTTTCCCTTTTTTGGGGGACTAAGGTGTTTTGATCTTATCCTTATTAACTTTAGACGATGTCGCCGACGGTCAACAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTTTGGAGCTAGAAGATTGGCTGTTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTC ] [+] EMBL CD114059 [ TAAGTTGTTTTGATCTTATCCTCATTAACTTTCGACGATGTCGCCGACGGTCAGCAAGAGTGCGCTCATTTTTACCAATAAGTATTTCACCTCTTGGTGGACAAATCTCTTCTGGAGCTAGAAGATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTACAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGCAGTGGAATTTCTTTAGAAGGTCCTTTAGCTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCCACTTCACCTTGTAAATACCACCGGC TTACATCTTAACA TTTACGTTTCAATGCCTTCCGTTTCTTTATCAA ] [+] EMBL CD189247 [ ATTGGCTGCTGAGACGACTGTAGGTCCAGATTCTTCTAATTTTGATGCTGCATCATTCTTAGCAGACGTGGAAGCAGGTATGTACTTATGTGGCACAAAGTGAAGACTAGAAAGTCTATCTAACTTGTCGAAGAGCTCCAACATTTCAGCCTGGATTGCATTCTTTTGTGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTNTACGTTCCAATG CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTTGC ] [-] EMBL CD159070 [ TGGGTCTCCTTGGTCTTCTTCAAGAATCTGATTTCTCTTGAGAAAGCCTTCATACTCTTCTACCAGTGACTTTTGAACAACATTCTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCAACATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTG ] [-] EMBL CD158296 [ AGTGACTTTTGAACAACATTTTGTAGTGGAATTTCTTTAGAAGGTCCTTTAACTTCCTTAACTTTGAAAACAGGACTGTCAAACATTCTTTCTTTGATGGCTTTAATAATGTAGTCATTTATAACAGCTTCATCATGAACTTCTGGCTTGAAAAGACCGTGGCGTTGTACGTCAAAA TGTTCTTCAAGCAAGGTATTCTCA TTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATC ] [-] EMBL CD157996 [ ACCGTGGCGTTGTACGTCAAAATTGTTCTTCAAGCAAGGTATTCTCATTTTCGTTTAGTAGCTGCAACTTCACCTTGTAAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATCAAGCa ] [+] EMBL CD128391 [ AAATACCA CGGCTTTACATC TAACATTTTACGTTCCAATG CATCCGTTTCTTTATCAAGCTTCTCTTGAAGAAGTTCGAAATTATGTCCCCTGTTCGCTTTCACCATCTTCACTAAGCGAAGTGAATGGAAGAATATCTAAATTTTTCGTCAACGACAAGGTTGAACTTCTGGAAGGTAAATGAATGCTTCATTTGAAAAGTGTTGCGTCACACTAGATTTACGGAATCAATTAAAACCTTGCATCACTTGGGTTAACAAGGAACTATTAGAAGATACATTCGGTTTACTTGGTTTGCTGGTTCTTGTTCACAATTAGAGAATGATGACCATGTGAAAATCGGAAGTGATAAACAATATTGTACCAAAGCTATACATAATTTCTCAGTAACTAACCAAAATATGTTGTTAGATATTCGTCTTCATCCAGTTAATA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||