These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 913 fasta sequence [GGGGTGAACAAATCATGAAATTGACGTGGCAACAAAAAAAAGGTGGGGGTAATCACTGTGAAATAAATACAAGATGATAATTTCATCATTAAAAATTCAAAATCATTAAGTAACAAAACCAAAAAATGTCCTCCCTCTTTCTCTCTCTAAGAGAAAGATATCATGATAAGTGTTATATCTTGTATTCAATGTGCTCAATTAAATTACTATTAAAACATGTATACGTATTGAAATGACTTGATGAGGCACACAGGTAGAAGCTACATAAGTGAATTCACATGAATTCATATAAAAATGAATCGGAC-ATTTTTTTTTCTTTTTCTTCGTTATTTTTGTATTTTTACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTA-TTTTTTTTTCAGTAATAAAAAGAG-AAAAAAAACACAAATAAACAAATTCTCATTGAATGTTTTTCCTTCATCCTGGGTCATCTATCTTTATTCTACAGTCTTTGTTGTTCTTGTTTGTTCTTTTCTAAAAAAAAGGAGGAATTGTGAAATCACGAAGATCTTTGTACCTTCTTCTTCTTTGTCATCATCGTCATCATATTCTAACGCATAAATTTAAACAAGATGATATTTTAGCCGATTTATTACGTGAAAATAATTTTTGTGGATAAATCACAGTACAGCCATAATTATGCGCACACATAATACCACCACGTAGCTTATCAACTGATTGTGATGATGATGGTGATAATGATGTANCAGTAGTAAAGGAATGTTTTGAAAATAATTTTAGTTTATTATTACCATTGTCATTAGAATGATTGTGTGTGTTACCATTATAATAAGTAGTTTGTTGTTGATGGTGATGATTTGAATAGGATGAATGATTAATACTACTCATGGTACTAGTATTTGTAGTAGTAGTAGTA] [-] EMBL CD201936 [GGGGTGAACAAATCATGAAATTGACGTGGCAACAAAAAAAAGGTGGGGGTAATCACTGTGAAATAAATACAAGATGATAATTTCATCATTAAAAATTCCAAATCATTAAGTAACAAAACCAAAAAATGTCCTCCCTCTTTCTCTCTTTAAGAGAAAGATATCATGATAAGTGTTATATTTTGTATTCAATGTGGTCAATTAAATTACTATTAAAACATGTATACGTATTGAAAAGACTTGATGAGGCACACAGGTAGAAGCTACATAAGTGAATTCACATGAATTCATATAAAAATGAATCGGACAATTTTTTTTTCTTTTTCTTCGGTAATTTTGGATTTTTACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTATTTTTTTTTTCAGTAATAAAAAGAGAAAAAAAAACACAAATAAACAAA ] [-] EMBL CD201915 [ GTGAACAAATCATGAAATTGACGTGGCAACAAAAAAAAGGTGGGGGTAATCACTGTGAAATAAATACAAGATGATAATTTCATCATTAAAAATCCAAAATCATTAAGTAACAAAACCAAAAAATGTCCTCCCTCTTTCTCTCTCTAAGAGAAAGATATCATGATAAGTGTTATATCTTGTATTCAATGTGCTCAATTAAATTACTATTAAAACATGTATACGTATTGAAATGACTTGATGAGGCACACAGGTAGAAGCTACATAAGTGAATTCACATGAATTCATATAAAAATGAATCGGAC ATTTTTTTTTCTTTTTCTTCGTTATTTTTGTATTTTGACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTA TTTTTTTTTCAGTAATAAAAAGAG AAAAAAAACACAAATAAACAAA ] [-] EMBL CD202017 [ GTGAACAAATCATGAAATTGACGTGGCAACAAAAAAAAGGTGGGGGTAATCACTGTGAAATAAATACAAGATGATAATTTCATCATTAAAAATTCAAAATCATTAAGTAACAAAACCAAAAAATGTCCTCCCTCTTTCTCTCTCTAAGAGAAAGATATCATGGTAAGTGTTATATCTTGTATTCAATGTGCTCAATTAAATTACTATTAATTCATGCA AGGTACAGAAATGACTTGATGAGGCACACAGGTAGAAGCTACATAAGTGAATTCACATGAATTCATATAAAAATGAATCGGAC ATTTTTTTTTCTTTTTCTTCGTTAGTTGGGTATTTTTACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTA TTTTTTTTCAGTAATAAAAAGAG AAAAAAAACACAAATAAACAAA ] [+] EMBL CD113807 [ ggaaCACTGTGAAATAGATACCAGATGATAATTTCATCATTAAAAATTCAAAATCATTAAGTAACAAAA CAAAAAATGTCCTCCCTCTTTCTCTCTCTAAGAGAAAGATATCATGATAAGTGTTATATCTTGTATTCAATGTGCTTAATTAAATTACTATTAAAACATGTATACGTATTGAAATGACTTGATGAGGCACACAGGTAGAAGCTACATAAGTGAATTCACATGAATTCATATAAAAATGAATCGGAC ATTTTTTTTTCTTTTTCTTCGTTATTTTTGTATTTTTACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTATTTTTTTTTTCAGTAATAAAAAGAG AAAAAAAACACAAATAAACAAATTCTCATTGAATGTTTTTC ] [-] EMBL CD116726 [ TAAGTGAATTCACATGAATTCATATAAAAATGAATCGGAC ATTTTTTTTTCTTTTTCTTCGTTATTTTTGTATTTTTACAAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTATTTTTTTTTTCAGTAATAAAAAGAGAAAAAAAAACACAAATAAACAAATTCTCATTGAATGTTTTTCCTTCATCCTGGGTCATCTATCTTTATTCTACAGTCTTTGTTGTTTTTGTTTGTTCTTTTCTAAAAAA ] [+] EMBL AI976801 [ AAAACATAAATGCAACAAGAAAATCCATTTTGAAGAAAATTA TTTTTTTTTCAGTAATAAAAAGAG AAAAAAAACACAAATCAACAAATTTTCATTGAATGATTTTCCTTCATCCTGGGTCATCTATCTTTATTCTACAGTCTTTGTTGTTCTTGTTAGGTCTTTTCTAAAAAAAAGGAGGAATTGTGAAATCACGAAGATCTTTGTACCTTCTTCTTCTTTGTCATCATCGTCATCATATTCTAACGCATAAATTTAAACAAGATGATATTTTAGCCGATTTATTACGTGAAAATAATTTTTGTGGATAAATCACAGTACAGCCATAATTATGCGCACACATAATACCACCACGTAGCTTATCAACTGATTGTGATGATGATGGTGATAATGATGTANCAGTAGTAAAGGAATGTTTTGAAAATAATTTTAGTTTATTATTACCATTGTCATTAGAATGATTGTGTGTGTTACCATTATAAT ] [+] EMBL CD170817 [ ATTCTACAGTCTTTGTTGTT TTGTTTGTTCTTTTCTAAAAAAAAGGAGGAATTGTGAAATCACGAAGATCTTTGTACCTTCTTCTTCTTTGTCATCATCGTCATCATATTCTAACGCATAAATTTAAACAAGATGATATTTTAGCCGATTTATTACGTGAAAATAATTTTTGTGGATAAATCACAGTACAGCCATAATTATGCGCACACATAATACCACCACGTAGCTTATCAATTGATTGTGATGATGATGGTGATAATGATGTAGCAGTAGTAAAGGAATGTTTTGAAAATAATTTTAGTTTATTATTACCATTTTCATTAGAATGATTGTGTGTGTTACCATTATAATAAGTAGTTTGTTGTTGATGGTGATGATTTGAATAGGATGAATGATTAATACTACTCATGGTACTAGTATTTGTAGTAGTAGTAGTA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||