These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8477#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 611 fasta sequence [CTCCAGGCCAAAAATTCGGCACGAGGGGAAAGGCCTTTACTTTCTCCGTTTAGTCCTAATCTTCCATATTCTGCAAAAGAACGATGGGTTTGCGTTTATCCTGCGTATCTAAATAATCGTCGTACAAGAGCTCAAGGGAGGAAATTGTCTGTGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATA-TTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTGG] [+] EMBL CD079758 [CTCCAGGCCAAAAATTCGGCACGAGGGGAAAGGCCTTTACTTTCTCCGTTTAGTCCTAATCTTCCATATTCTGCAAAAGAACGATGGGTTTGCGTTTATCCTGCGTATCTAAATAATCGTCGTACAAGAGCTCAAGGGAGGAAATTGTCTGTGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATANTTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTG ] [-] EMBL CD074018 [ GAAAGGCCTTTACTTTCTCCGTTTAGTCCTAATCTTCCATATTCTGCAAAAGAACGATGGGTTTGCGTTTATCCTGCGTATCTAAATAATCGTCGTACAAGAGCTCAAGGGAGGAAATTGTCTGTGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATA TTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTGG] [-] EMBL AW017304 [ ATGGGTTTGCGTTTATCCTGCGTATCTAAATAATCGTCGTACAAGAGCTCAAGGAAGGAAATTGTCTGTGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGAAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGGACAATTTACAAATAGTCAATCCGTTTAATCATATTTGGGAAAGGCTCTTCCTGTGGTGCGGTCAAGAAGGCCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACGTAGTATTATGTAATTAACATAAACATACTTCATA ATGGGTGGTTTTATCTTAACTTGTTACTTATCAGTGTCTTTACAATTGTCGTAAATTAAAAATATAGTAAAGATTGG] [-] EMBL AI976912 [ GGAAATTGTCTGTGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATA TTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTGG] [+] EMBL CD078802 [ TGGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATA TTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTG ] [-] EMBL CD073262 [ GGAACACTGTGTTGATAATCCCAAGCACTCAGAAGTAACAATGATTTTGGGGAAGCTCTCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGAAGGCTCTTCCTGTGGTGCGGTCAAGAAGACCAGCTACATCTAGTTCTAGTACTACGGAACAAACTTTCCAAGGAAAGAAAAACAAGCGAAAAAGGAAGTGAATACATGGATTTCAAAGTTTGACATAACCTACTATTATGTAATTAACATAAACATACTTTATA TTGGGTGGTTTTATCTTAACTTGTTACTTCTCAGTGTCTTTACAATTGTCGTAGATTGAAAATATAAAAAAGATTGG] [-] EMBL CD179224 [ TCTCTCGACTATCTGTTGGAGACAAAGGTTCATCCCAAGGAAAGGGATGCTTTTGAACCTATGAACAAATGGCGTGTCCGCGTCCATTTGAAAAATGATGATGGCAGTCCCGTAAATGAACAATTTCCAAATCGTCAATCCCTTTTATCATATTTGGGGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||