These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8484#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 413 fasta sequence [CCACGGAGATGGCGCCACGGAGTATTTGTTCATGACTATTTGCACAGTGCGACCAGTGTTTCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTG-ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTCTTCTGGGTCCTCCGTGATGGGTAACTTTTTAGTAGTTGACCTACAGAAGTCGGTGAGGAGCGCAACCACAAG] [+] EMBL CD144726 [CCACGGAGATGGCGCCACGGAGTATTTGTTCATGACTATTTGCACAGTGCGACCAGTGTTTCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTG ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTCTTCTGGGTCCTCCGTG ] [-] EMBL CD144656 [ aaAGTATTTGTTCATGACTATTTGCACAGTGCGACCAGTGTTCCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTG ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTC ] [-] EMBL CD201206 [ TGACTATTTGCACAGTGCGACCAGTGTTTCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTG ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTC ] [+] EMBL CD151759 [ TGTTTCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTGCACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTATCATTTGTTTTTGTTTGTGAGCTTTGTCAGCCTCGCCAGCTGCATCTGACACAGCTTTGACTGCGTCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTGCTCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTAGCAGGTTTCTTACGCTTTTCATTGTCTTCTGGGTCCTCCGTAATGGGTAACTTTTTAGTAGTTGACCTACAGAAGTCGGTGAGGAGCGCAACCACAAG] [+] EMBL CD113653 [ TGTTTCGAAAACGTTGCCCTGATGTTCTTTTAGATATCGTTCCGCCGTAAGTTTGCTAACTTCGAGTTCTTG ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAA ] [-] EMBL CD201174 [ GTAAGTTTGCTAACTTCGAGTTCTTG ACAAATGAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTATGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTCAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTC ] [-] EMBL CD118753 [ TAACTTCGAGTTCTTG ACAAATAAGTGACACATCTTCGTTTTTGACTTTAATCTTTAGCATTTGTTTTTGTTTCTGAGCTTTGTCAGCATCGCCAGCTGTATCTGACACAGCTTTGACTGCATCTAGGCCAACACTAAGCTCCTTCTCTTTAAAGTAATCAGTAACACGTTCCAGATCTGCTGCACCACGCTCATCGTGTGTTGTAGGTTTCTTAGGCTTTTCATTGTCTTCTGGGTCC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||