cluster # 8504

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Schistosoma mansoni
cluster # 8504 cluster # 8504 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8504#0 length = 323 sequences # 7

consensusID : consensus_8504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 323
fasta sequence

                              [CCAATAATTTGTTTAATTCTTCATCATTTCTTATAGCTAATTGTAGATGACGAGGAATAATACGTGTCTTCCTATTGTCTCTTGCTGCATTGCCAGCTAATTCCAACACTTCAGCAGCTAGATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCACCTTTTCCTCGTCCGCTCATGATACCGCGTTAAGTATATTTATTTAGTTAA]

[+] EMBL CD145401             [CCAATAATTTGTTTAATTCTTCATCATTTCTTATAGCTAATTGTAGATGACGAGGAATAATACGTGTCTTCCTATTGTCTCTTGCTGCATTGCCAGCTAATTCCAACACTTCAGCAGCTAGATATTCTAGAACGGCTGCCAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCACCTTTTCCTCGTCCGCTCATGATACCGCGTTAAGTATATTTATTTAGTTAA]
[+] EMBL BG931703             [                                                                 GTCTTCTTATTGTCTCTTGCTGCATTGCCAGCTAATTCCAACACTTCAGCAGCTAGATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCACCTTTTCCTCGTCCGCTCATGA                             ]
[-] EMBL CD180081             [                                                                                               GCTAATTCCAACACTTCAGCAGCTAGATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCAAGCGCGTGTCTTACCACC                                                 ]
[-] EMBL CD136229             [                                                                                                                        GATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCAC                                                  ]
[+] EMBL CD193835             [                                                                                                                         ATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACGGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCA                                                   ]
[-] EMBL CD136249             [                                                                                                                                          CTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTCCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCAC                                                  ]
[+] EMBL CD158662             [                                                                                                                                                  ACTGGAGCACCAGCTCCAACACGTTCAGCATAATTGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAGATCGACTTTTTGCCCTAGCGCGTGTCTTACCA                                                   ]




>consensus_8504#0
CCAATAATTTGTTTAATTCTTCATCATTTCTTATAGCTAATTGTAGATGACGAGGAATAA
TACGTGTCTTCCTATTGTCTCTTGCTGCATTGCCAGCTAATTCCAACACTTCAGCAGCTA
GATATTCTAGAACGGCTGCTAAATAAACTGGAGCACCAGCTCCAACACGTTCAGCATAAT
TGCCCTTTCTCAGGAGTCTATGAACACGACCAACAGGGAATTGTAATCCAGCACGAGCAG
ATCGACTTTTTGCCCTAGCGCGTGTCTTACCACCTTTTCCTCGTCCGCTCATGATACCGC
GTTAAGTATATTTATTTAGTTAA

clustalw multiple alignements is not computed in this case