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Schistosoma mansoni
cluster # 8511 cluster # 8511       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8511#0 length = 1677 sequences # 7  

consensusID : consensus_8511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1677
fasta sequence
                              [CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC]

[-] EMBL CD116276             [CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCAGCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGCTGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCAGCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCAGGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACCAAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTTGGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD192430             [                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCAAACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD192131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACGTAAACTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCTGTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGACTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGAGCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAGGAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAAGTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCATGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGAGTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAAGCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD090000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGGACGTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCT                                                                                                                                                  ]
[-] EMBL CD184815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTCGTTATTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAAC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD146940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTCATCACTTTGTTTTCAGAGGACTTTATGCTAAGACGTGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACCTTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCTCCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCAAATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAG                                                                                                                                                                                                                                                                   ]
[+] EMBL CD170749             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAAAATACAACTTGAAGTTTTTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCTCTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGATATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAGGGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATTCGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTATCATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC]


>consensus_8511#0 CCTTAGAATGGCAAACNNCAGCGTCTATCCTNNTTCTCATATTTGNCAGCGAGAATAGCA GCAGAACGACCAAAACCTTTAGCTTGATCAGCCATCTCTTGCGTTTGTAGGTCTAACTGC TGTAACCGCTCACCACGTTCAATGGCAGCATTTCTAGCCCGTGCAATTTCAGAGGAGGCA GCACCCGTCTGACCAGATAACTTTTCTATGCGAGCATTTGGCAGTAGAGTAGTAGCGCCA GGTGTCCCCTTCCCCGAACTTGCTTCACCAATTAATTCATCTCGATCTAATGAAGACACC AAAGTTCCACTTAACAAATTTTTGAAAAAGTTTTTCTTAGGAGGTTCTGGCATATTACTT GGTAGAAATATCTCACCTTGCATATCACGTAAATTCGCACAGACATCTGATGCCCAGGTG ACTTTAGCTAATTCTGAAGGCGACACCAAATACACAGATTGACCATACTGACCAAACGCA AACGAACGGCTTACACATTCTGTATACGGTAAATAATCCACATCCATTAGTAAACGTAAA CTCGGCAATGAGAAGGCAACAAAATGTCCATTTGCAAGGTAACACGCGAGGAAACTAGCT GTTGATGTTCCACTATTATGTGACGGTCTCAAACGTTGTACGGAAGCTCGAACCACTTGA CTTGTTTCAGTTATTTTGACCTTATAAAGACAATTTTGTGAAGGAAGTGCAACTACTCGA GCTTGTTTTTCTGAACAAAGAACAAGCAGCTGTCGGTCCGTCGTGGCAATTGAGTGCTAG GAAACGCACCATACGATACGAAGTGAAAATGGTGTTTAAAGAGACGGAAGTGCTGTGGAA GTCCTGTAAATGCGATGACAGGACTACCAAATAATCACCACTGGCTTTTATTCTGAGCCA TGTTCAGTGACGTTTCACTGCACTGAGTTGTACGATTGATAGGAGAAGGACCCTTGTCGA GTTACGTTGTAGTCGTGGTCGCGACCAGGACTTATTTAGATTTTGATGATGTATAGAGAA GCTGTGACGGTGTNTTACGGAGAAGGGAGAGGACGTTCGTTATTCATCACTTTGTTTTCA GAGGACTTTATGCTAAGACATGCTTCTACTGCCTGAGAGTTGAAAGTGTGATAACGAACC TTATAAAACGGCGTCTTTTGATAAATGTTGGCTTCTGCGATTTTTTTGAGAACATCTGCT CCACGTGTTTCCACGTAAAAATGAATAAGGCCATCCGCGACAAGGAGTTCTACGGTGTCA AATTTGGTTTCTCCAACAAAGTGCTGCTTGGTTAAGGGATCAAAATACAACTTGAAGTTT TTTGCCACTTTGTCGAACCAAATGACCAACGTATAGGCGTTTTCGGCACGTTGACTGTCT CTAATAAGGTAAGAACCATCATCTGCATTAGAAAGTAGCTCTTCGGTTTCCTGACGCGAT ATTGGGCCATGATATTCAACACCATACTGGGGTGGGCAATGACTTAAAACTCGATTGCAG GGTATAACATGTGGAGAAGGAGCTTCACGCTGCAAATTGTACAACTTATTTTTCCAGATT CGCAGTTCAAGACCTCTATCTGACATCACATCTTATTTCACAGGTAGAACCACTAGGTAT CATAAAACCATTACGAATGGAGACTATCATATACACCGGGTCATTCGACCGGCCGCC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)