cluster # 8512

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Schistosoma mansoni
cluster # 8512 cluster # 8512 Sequences # 7 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8512#0 length = 506 sequences # 7

consensusID : consensus_8512#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 506
fasta sequence

                              [AGTTATCTTCCAAACAAGCCATTTTAAGGAAGGAGGAAGAAAATAAAATCAAGGCCGAAGCTGAAGTCGCCTCACTACAGAAGCGAATTCGACAGCTTGAAGATGAATTGGAATCTACTGAGACTCGTCTTCAAGAAGCTACTGTTAAGCTTGAAGAAGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA-GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCCGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACAA]

[+] EMBL CD096245             [AGTTATCTTCCAAACAAGCCATTTTAAGGAAGGAGGAAGAAAATAAAATCAAGGCCGAAGCTGAAGTCGCCTCACTACAGAAGCGAATTCGACAGCTTGAAGATGAATTGGAATCTACTGAGACTCGTCTTCAAGAAGCTACTGTTAAGCTTGAAGAAGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCTGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACA ]
[+] EMBL CD096250             [AGTTATCTTCCAAACAAGCCATTTTAAGGAAGGAGGAAGAAAATAAAATCAAGGCCGAAGCTGAAGTCGCCTCGCTACAGAAGCGAATTCGACAGCTTGAAGATGAATTGGAATCTACTGAGACTCGTCTTCAAGAAGCTACTGTTAAGCTTGAAGAAGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAACCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGGGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCTGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACA ]
[+] EMBL CD070295             [AGTTATCTTCCAAACAAGCCATTTTAAGGAAGGAGGAAGAAAATAAAATCAAGGCCGAAGCTGAAGTCGCCTCACTACAGAAGCGAATTCGACAGCTTGAAGATGAATTGGAATCTACTGAGACTCGTCTTCAAGAAGCTACTGTTAAGCTTGAAGAGGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGG                                                                                                                                               ]
[-] EMBL CD070282             [                                                                                                                                                         AAGAAGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCCGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACAA]
[-] EMBL CD070211             [                                                                                                                                                             AGCAAGTAAAGCTGCTGATGAAAGTGATCGTGCTCGTCGGGTACTTGA GGCNCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCCGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACAA]
[-] EMBL CD070414             [                                                                                                                                                                               TGAAAGTGATCGTGCTCGTCGGGTAC TGAGGGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATNTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCCGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACAA]
[-] EMBL CD070420             [                                                                                                                                                                                                       ACTTGA GGCCCGTCAGACTGCGGAAGACGAGCGGATTTTACATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACGAGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCCTGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATAATGTAAAATCTTTGGAGATATCCAAACAAGAGTTAAATAAACAACGTAGTCTTCATCAATCTCAACTTGCCTCTTTATCAAAACAA]




>consensus_8512#0
AGTTATCTTCCAAACAAGCCATTTTAAGGAAGGAGGAAGAAAATAAAATCAAGGCCGAAG
CTGAAGTCGCCTCACTACAGAAGCGAATTCGACAGCTTGAAGATGAATTGGAATCTACTG
AGACTCGTCTTCAAGAAGCTACTGTTAAGCTTGAAGAAGCAAGTAAAGCTGCTGATGAAA
GTGATCGTGCTCGTCGGGTACTTGAGGCCCGTCAGACTGCGGAAGACGAGCGGATTTTAC
ATTTGGAATCTGTGGTACAAGAAACTGCAAAATCTGTGAGAGATGCAGAAACAAAATACG
AGGAGGCGGCTCGTAAGCTGGCTATCACGGAAGTGGAACTCGAACGGGCTGAGTCTCGCC
TGGAAGCTGCCGAAAGTAAAATTACAGAACTCGAAGAAGAGTTACGCATTGTTGGTAATA
ATGTAAAATCTTTGGAGATATCCGAACAAGAGTTAAATAAACAACGTAGTCTTCATCAAT
CTCAACTTGCCTCTTTATCAAAACAA

clustalw multiple alignements is not computed in this case