These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8543#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 847 fasta sequence [GATTTCAAGAATTGCATAATCATGCTTCTCAATTGTTCTTCAGTATTTTCAACAAAAGTAAAATTTCTTAGTGCAAACTGCTTTAAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA-GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTAG] [+] EMBL CD116841 [GATTTCAAGAATTGCATAATCATGCTTCTCAATTGTTCTTCAGTATTTTCAACAAAAGTAAAATTTCTTAGTGCAAACTGCTTTAAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAAC ] [-] EMBL CD154880 [ AAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTA TGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCCTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTG ] [-] EMBL CD143409 [ ATTCATCTCCATCTGAGTTAGGC ACTCAGGCATCAGAACTGTTTGTANAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTG ] [+] EMBL CD112627 [ CATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACCGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTA ] [+] EMBL CD112620 [ CATCTGCTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAATAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCATGAGACTACAAGGTTGATTACATTCAGGTGCACTA ] [+] EMBL CD112778 [ GGTTTATTGCAAATTCGACCTCAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCAC ] [-] EMBL CD144088 [ AACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||