Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8543 cluster # 8543       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8543#0 length = 847 sequences # 7  
consensusID : consensus_8543#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 847
fasta sequence 
                              [GATTTCAAGAATTGCATAATCATGCTTCTCAATTGTTCTTCAGTATTTTCAACAAAAGTAAAATTTCTTAGTGCAAACTGCTTTAAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA-GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTAG]

[+] EMBL CD116841             [GATTTCAAGAATTGCATAATCATGCTTCTCAATTGTTCTTCAGTATTTTCAACAAAAGTAAAATTTCTTAGTGCAAACTGCTTTAAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAAC                                                                                                                                                                                                                                                         ]
[-] EMBL CD154880             [                                                                                    AAGTGGTCAGGATACTCTGGAGGATCAAATGGGCATTCATCTCCATCTGAGTTAGGCAACTCA GCATCAGAACTGTTTGTAAAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTA TGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCCTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTG                                                                                                                                                                                                                     ]
[-] EMBL CD143409             [                                                                                                                      ATTCATCTCCATCTGAGTTAGGC ACTCAGGCATCAGAACTGTTTGTANAACCTCTTTTCCAAGTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTATCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATATCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCATACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTG                                                                                                                                            ]
[+] EMBL CD112627             [                                                                                                                                                                                                                                                                                                                                                                                                                             CATCTACTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACCGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTA ]
[+] EMBL CD112620             [                                                                                                                                                                                                                                                                                                                                                                                                                             CATCTGCTAATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAATAGCCTCCAAACATGATTGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTTTGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAAGGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAAATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCATGAGACTACAAGGTTGATTACATTCAGGTGCACTA ]
[+] EMBL CD112778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTTTATTGCAAATTCGACCTCAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCAC   ]
[-] EMBL CD144088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AACTGTACTCCGTGTCCTCCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAAGTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGTGCACTAG]




>consensus_8543#0
GATTTCAAGAATTGCATAATCATGCTTCTCAATTGTTCTTCAGTATTTTCAACAAAAGTA
AAATTTCTTAGTGCAAACTGCTTTAAGTGGTCAGGATACTCTGGAGGATCAAATGGGCAT
TCATCTCCATCTGAGTTAGGCAACTCAGCATCAGAACTGTTTGTAAAACCTCTTTTCCAA
GTGCTTGTATTAGCATATTGACTGTTTGTATGTGACTCTGTAGAACTAGTACAAGAATTA
TCACATGCTAATAAAGGTATTGGCTTTTGAGAATCATGCTCAGTAAAAAGTGGATGAATA
TCTGTCAATGATGCACCGCTCACATTGCGTTCATGCTCTAAAAGTAGATATTGCTTTGCA
TACACCTGATGACATTGTTGACTTTGTTTGAGTTTGCCACAGCGACAGACGACATCTACT
AATGCAGTGCAAATCAACTGGCTTTCTAAACCGTGATTAACAAAAGCCTCCAAACATGAT
TGATTTCGGACTTCGTGACAAGGTAAACCACATGGATGTCCGCAACCAGGACGAGGTTTT
TGACAGGGTTGGATGCATACAGTATTACATTCTTCGTCGGATGAAGCTAGATCCAAACAA
GGACCAGAGTGACATTTACGCTGACAAAGATGTGAGCAACCTGGAAGTGGTTTATTGCAA
ATTCGACCACAACTTCGCACTTCTTGAAAACAAGGCACTTTAAACTGTACTCCGTGTCCT
CCTGGACAAACTTTATCCATTATGACTGTACAAGGTGGACACTTAGGTTCCATATGACAA
GTATGTTTCACTGGATGATCACAATTATGCGTGAGACTACAAGGTTGATTACATTCAGGT
GCACTAG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)