These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8550#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 778 fasta sequence [GCGCCTGAATGAGTTAAGACGTTGCAATGAGATTACCACCGTTCCTTTCGCATGTTTTTGTCAAGCGTTGTGTGAATATCAGTTCTCCTTGTCGTACATGTACAGTTTTAAAATCGAATTATACTTCAGACCATGGTTCATATTTCGCCTCTAGGATATCTCTACGACAACTGCACTTCAACCCCTGTATTTTTGCCATACGTGTAGTTAATGTACCTCCGTTCGCTGAATCTGTCACAGAAGGGGATATCGTGTGG-AAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTGTCCCAGCCCCATGTTCAGGTGTGATAACACAACTTCTTGTTGAAGATGGAGGAAAAGTTACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCGTTCCAACTTCCAAGGTCTCTGAAAAGCCATCCCAAGAGACTGTAAAAAAACAGCCTGAAGAGAAACTTCTCGTCTCACCTCGGCCTCCTTCACCAGTTACTCACTCTCCACCTCCAGAAATAGCTCAAAGTCTTGCAACACCATCCTTATCCCCATCTCTTGATAGTGCACGTGCAGAACAGCGTGTAAAG-ATGAGTCGTATGAGGC-TGCGGATCGCCCAACGTCTAAAAGATGCCCAGAATACGTGTGCGATGTTAAGCACCTTTAATGAGATTGATATGTCAAATCTTTTCGAACTTAGAAGTCAGTATAAAGATACCTTCTTGAAAAATCATGGTGTGAAGTT] [+] EMBL CD190218 [GCGCCTGAATGAGTTAAGACGTTGCAATGAGATTACCACCGTTCCTTTCGCATGTTTTTGTCAAGCGTTGTGTGAATATCAGTTCTCCTTGTCGTACATGTACAGTTTTAAAATCGAATTATACTTCAGACCATGGTTCATATTTCGCCTCTAGGATATCTCTACGACAACTGCACTTCAACCCCTGTATTTTTGCCATACGTGTAGTTAATGTACCTCCGTTCGCTGAATCTGTCACAGAAGGGGATATCGTGTGG AAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTGTCCCAGCCCCATGTTCAGGTGTGATAACACAACTTCTTGTTGAAGATGGAGGANAAGTTACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCGTTCCAACTTCCAAGGTCTCTGAAAAGCCATCCCAAGAGACTGTAAAAAAACAGCCTGAAGAGAAACTTCTCGTCTCACCTCGGCCTTCTTCACCAGTTACTCAC ] [+] EMBL BF936597 [ AAGACGTTGCAATGAGATTACCACCGTTCCTTTCGCATGTTTTTGTCAAGCGTTGTGTGAATATCAGTTCTCCTTGTCGTACATGTACAGTTTTAAAATCGAATTATACTTCAGACCATGGTTCATATTTCGCCTCTAGGATATCTCTACGACAACTGCACTTCAACCCCTGTATTTTTGCCATACGTGTAGTTAATGTACCTCCGTTCGCTGAATCTGTCACAGAAGGGGATATCGTGTGG AAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTGTCCCAGCCCCATGTTCAGGTGTGATAACACAACTTCTTGTTGAAGATGGAGGAAAAGTTACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCGTTCCAACTTCCAAGGTCTCTGAAAAGCCATCCCAAGAGACTGTAAAAAAACAGCCTGAAGAGAAACTTCTCGTCTCACCTCGGCCTCCTTCACCAGTTACTCACTCTCCACCTCCAGAAATAGCTCAAAGTCTTGCAACACCATCCTTATCCCCATCTCTTGATAGTGCACGTGCAGAACAGCGTGTAAAGAATGAGTCGTATGAGGCTTGCGGATCGCCCAACGTCTAAA ] [+] EMBL CD116308 [ TGTGAATATCAGTCCTCCTTGTCGTACATGTACAGTTTTAAAATCGAATTATACTTCGGACCATGGTTCATATTTCGCCTCTAGGATATCTCTACGACAACTGCACTTCAACCCCTGTATTTTTGCCATACGTGTAGTTAATGTACCTCCGTTCGCTGAATCTGTCACAGAAGGGGATATCGTGTGG AAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTG ] [-] EMBL CD154730 [ TGTCGTACATGTACAGTTTTAAAATCGAATTATACTTCAGACCATGGTTCATATTTCGCCTCTAGGATATCTCTACGACAACTGCACTTCAACCCCTGTATTTTTGCCATACGTGTAGTTAATGTACCTCCGTTCGCTGAATCTGTCACAGAAGGGGATATCGTGTGGAAAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTGT ] [-] EMBL CD097459 [ TCTGTCACAGAAGGGGATATCGTGTGG AAAAAAGCCGTCGGTGATACAGTAAATGTAGACGATGTGATTGCGGAGATCGAAACTGACAAAACTAATGTCCCTGTCCCAGCCCCATGTTCAGGTGTGATAACACAACTTCTTGTTGAAGATGGAGGAAAAGTTACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCG ] [+] EMBL CD189772 [ AGATCGAAACTGACAAAACTAATGTCCCTGTCCCAGCCCCATGTTCAGGTGTGATAACACAACTTCTTGTTGAAGATGGAGGAAAAGTTACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCGTTCCAACTTCCAAGGTCTCTGAAAAGCCATCCCAAGAGACTGTAAAAAAACAGCCTGAAGAGAAACTTCTCGTCTCACCTCGGCCTCCTTCACCAGTTACTCACTCTCCACCTCCAGAAATAGCTCAAAGTCTTGCAACACCATCCTTATCCCCATCTCTTGATAGTGCACGTGCAGAACAGCGTGTAAAG ATGAGTCGTATGAGGC TGCGGATCGCCCAACGTC ] [+] EMBL CD137232 [ ACTGCAGGTCAAGACATATTTAAAATAGAGGAGGGTGCCGTTCCAACTTCCAAGGTCTCTGAAAAGCCATCCCAAGAGACTGTAAAAAAACAGCCTGAAGAGAAACTTCTCGTCTCACCTCGGCCTCCTTCACCAGTTACTCACTCTCCACCTCCAGAAATAGCTCAAAGTCTTGCAACACCATCCTTATCCCCATCTCTTGATAGTGCACGTGCAGAACAGCGTGTAAAG ATGAGTCGTATGAGGC TGCGGATCGCCCAACGTCTAAAAGATGCCCAGAATACGTGTGCGATGTTAAGCACCTTTAATGAGATTGATATGTCAAATCTTTTCGAACTTAGAAGTCAGTATAAAGATACCTTCTTGAAAAATCATGGTGTGAAGTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||