Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8596 cluster # 8596       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8596#0 length = 606 sequences # 7  

consensusID : consensus_8596#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 606
fasta sequence
                              [TATTAACACTCACGGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG-AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAGCATTCACAGAGAAGGTGAAAAGTAAAATAATATCCACATAGATGTAAATAACAAGAAAAAAATACGGGAAAATAAACAGAATAACAGCGCAACATAGTGGAAATTATATTCACAAAAGAGTAAACAAATCATCCTATAGTTCCAAAAATTTCTCTCAATCCTTTCTAGTTTTTTTTGTTTCATTTTTATCACTTCTACTTTGATGCCTGGCTAGTGACGATGATGAAGGACGAAAAGTAAACGCTTCATTTGGTTGAGTGTCAAGATGATT]

[+] EMBL CD073569             [TATTAACACTCACGGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAGCATTCACAGAGAAGGTGAAAAGTAAAATAATATCCACATAGATGTAAATAACAAGAAAAAAATACGGGAAAATAAACAGAATAACAGCGCAACATAGTGGAAATTATATTCACAAAAGAGTAAACAAATCATCCTATAGTTCCAAAAATTTCTCTCAATCCTTTCTAGTTTTTTTTGTTTCATTTTTATCACTTCTACTTTGATGCCTGGCTAGTGACGATGATGAAGGACGAAAAGTAAACGCTTCATTTGGTTGAGTGTCAAGATGATT]
[+] EMBL AI068339             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAGC TTCACAGAGAAGGTGAAAAGTAAAATAATATCCACATAGA                                                                                                                                                                                                                                     ]
[+] EMBL AI068038             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAGC                                                                                                                                                                                                                                                                              ]
[+] EMBL AI068178             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAAGAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAGC                                                                                                                                                                                                                                                                              ]
[+] EMBL AI067674             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTCACAGCGATGAATATTTCGGGGAAAAAG                                                                                                                                                                                                                                                                               ]
[+] EMBL AI068283             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGG AAAGGGAAGGATAGGACATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAAGCGAATTC                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI067052             [             GGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATAACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAAATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACATTTTACGCCTAAACAAATATCAAACTACCAGTAATATCCTGTGGNAAAGGGAAGGATAGGACATACATACATGTATGCGTGTGT                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_8596#0 TATTAACACTCACGGATATAATGCGAAGAAAAAGGTACAGAAAGTTTTCACATGTAAATA ACAAAAATAATAAAAGTAATATTATGAAATAAATAACAATATATAAACGTGAAATTTAAA ATTACCTTTTTGTATACACATAAAACAAAACAATTAAGATGTAATAATGAACTTCAACAT TTTACGCCTAACCAAATATCAAACTACCAGTATTATCGTGTGGAAAGGGAAGGATAGGAC ATACATACATGTATGCGTGTGTGTGTGTGTATAAGTTATAAATCTACATCTTAGAGAGAA GCGAATTCACAGCGATGAATATTTCGGGGAAAAAGCATTCACAGAGAAGGTGAAAAGTAA AATAATATCCACATAGATGTAAATAACAAGAAAAAAATACGGGAAAATAAACAGAATAAC AGCGCAACATAGTGGAAATTATATTCACAAAAGAGTAAACAAATCATCCTATAGTTCCAA AAATTTCTCTCAATCCTTTCTAGTTTTTTTTGTTTCATTTTTATCACTTCTACTTTGATG CCTGGCTAGTGACGATGATGAAGGACGAAAAGTAAACGCTTCATTTGGTTGAGTGTCAAG ATGATT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)